| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3513 |
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| Symbol | |
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| ID | 4075192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 550003 |
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| End bp | 550842 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005028 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_611747 |
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| Protein GI | 99078489 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3306] Glycosyltransferase involved in LPS biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.217336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGG CGACATACAT GATCTCTCTG GACCGGGCCA AGGGTCGGCA TGCAGCGATG
CAGGCCACCC TGAGGGATGC CGGTCTGGAC GCGGAATTCG TGTCCGCCGT GGATCTGGCC
GAGACCTCGG AAGAGGAGCT GTTGCAGCAG TGCAAGAGCT TTGGCCCCTG GGGGGTGTTT
GCCCATGGCA ACATGGCCTG CACCCTGAGC CACGCCAAGG TTTGGGAACA GTTTCTGGCG
TCGGATGCGG ATGTTGCCCT CATCTTTGAG GATGATGTCT TTATCTCGGC AGAGTTGCGT
CAATGGACAG AGGATCTGAG CTGGTGGCCG CAGGGCTGTG AACTTGTGAA CCTGGAGTTC
TGGCGCAGCG AGACTCTCAA GGTGATGGTT GGCACCTCTG CGTCGCAGCA CCTTGGTCGC
CAGGTAGCAC CGATGTTGTC GCGCAATCCC GGCTCTGCCG GCTACCTGGT CTCCCGCAAG
GGGGCAGAGG CTCTGTTGGC GTCGCGGCCA TTTACGATGT CGATTGATCA GTTGCTGTTC
AATCCACTTG TTTCCCCTTT GGCGGTCTCT CTTGAACCCC ATCAGATCAC CCCTGCGCTT
GTGACGCAGG GCAATACACC TCCTGAGGAG GGCACCTTTC TCGGGCATGC GCAGCGCAAG
CCCAAGGGTG CGCTCTACCG TAAACAAAAA CGCCTGCGGG GCATGGCCGA GCTGCGCGCT
CTGCCCCTGC ATCTCCTTCG CCTGATCTCG GGGCGCGCAC GGCTTGTGCG GGTTCTTTAC
GCGGATCGGG CGCTCACCGA CGACAGCGCG GCGCGTGCCG CCGAGGCACA AACCGCATAA
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| Protein sequence | MKLATYMISL DRAKGRHAAM QATLRDAGLD AEFVSAVDLA ETSEEELLQQ CKSFGPWGVF
AHGNMACTLS HAKVWEQFLA SDADVALIFE DDVFISAELR QWTEDLSWWP QGCELVNLEF
WRSETLKVMV GTSASQHLGR QVAPMLSRNP GSAGYLVSRK GAEALLASRP FTMSIDQLLF
NPLVSPLAVS LEPHQITPAL VTQGNTPPEE GTFLGHAQRK PKGALYRKQK RLRGMAELRA
LPLHLLRLIS GRARLVRVLY ADRALTDDSA ARAAEAQTA
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