| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3497 |
|---|
| Symbol | |
|---|
| ID | 4075176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008043 |
|---|
| Strand | - |
|---|
| Start bp | 535485 |
|---|
| End bp | 536399 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638005012 |
|---|
| Product | Zinc finger/thioredoxin putative |
|---|
| Protein accession | YP_611731 |
|---|
| Protein GI | 99078473 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02098] MJ0042 family finger-like domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.557897 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACTGA TATGCCCCAA TTGCGGCGCA CAGTATGAGG TGCCCGAGGA TGTGATCCCG
CAGGACGGGC GTGATGTGCA GTGTTCCAAT TGCGGTGATA CCTGGTTTCA GCCCTCCACG
CAGATGATGG CCGAAGAGGC CGAGGCCCGC GCCGCCACCC CGCCTCCGGC AACGGAAGCG
GGTTCTGTCG ACGCCGCTCA CACGCGAGAG GACGCGCTGC AGGAGCCGCC CCAGGACGCA
TGGCCAAGCG CCCCCGAGCC CGAGCCGGCA GCGGCCGAAG AGCACTGGCA CGAAGATCCG
GATGCGCCTG CACCGGGCAC ACCGCCAGCC GCCCCGCCAG AACCCGAAGC AGACCCCGCG
CCCGCAAAGC GTCGTCTCGA TCCCGAGATC TCGCGCGTGT TGCGCGAAGA AGCCATGCGC
GAAGAAGCCC TGCGGTCTGG GCGCGACAGT TTGGAAACCC AGCCAGAATT GGGGCTTGAG
GACCTGCCTG AGGATGAAGC CGCGCGCCGG GCCCGCCAAT CCGAGGAGCG GGTGGCCCGG
ATGCAAGGCC TGGACCCTGC CCCGCAGGCG CATGCCGCGC CTTTGGACCG GGATCGCCTA
GACCCGCAGC CGGGATCGCG CAGAGGGTTG TTGCCGAATA TTGAGGATGT AGCCACCAAT
GCGCCGGGGG AAACCAAACC CGCGACGCCA CCGCCTGCGG ATGCCCCCGC GCCACCTGCG
CGCAAACGCG GATTTTCGCG CGGATTTCTG TTGGTGATCC TACTGATGGC GCTGGCTATT
CTGGTTTACA GCAATGCCGC AATGATTGCG GAGAGCCTGC CGCAAGCTGA TCCTTACCTC
AGCTCCTATG TGGCCTGGGT CGATCAGTGG CGGCTCTGGC TTGATGCGCA AGCACAGGCG
CTGGCAGCAG AATAA
|
|---|
| Protein sequence | MRLICPNCGA QYEVPEDVIP QDGRDVQCSN CGDTWFQPST QMMAEEAEAR AATPPPATEA
GSVDAAHTRE DALQEPPQDA WPSAPEPEPA AAEEHWHEDP DAPAPGTPPA APPEPEADPA
PAKRRLDPEI SRVLREEAMR EEALRSGRDS LETQPELGLE DLPEDEAARR ARQSEERVAR
MQGLDPAPQA HAAPLDRDRL DPQPGSRRGL LPNIEDVATN APGETKPATP PPADAPAPPA
RKRGFSRGFL LVILLMALAI LVYSNAAMIA ESLPQADPYL SSYVAWVDQW RLWLDAQAQA
LAAE
|
|---|
| |