| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3460 |
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| Symbol | |
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| ID | 4075094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 483277 |
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| End bp | 484920 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638004969 |
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| Product | hypothetical protein |
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| Protein accession | YP_611694 |
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| Protein GI | 99078436 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02231] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTTG TTCTCTCTTC TGTCCTTGTT GGGGCTGCGG CCCTGTTGTC CACGACCGCA
TTGGCGGAGA CCTTCACCGC CGCAAGCCGC GTCAGCGCGG TGACCGTCTA TCCCAGCGAG
GCATTGATGA CCCGCACCGC CGAAGTGACG CTGCCCGCAG GCCGTCACCG GATCATCATC
ACGGGAATGC CCTTTGTGGA TGAGGTGGAA ACCCTGCAGG TGACGCATCC CGGCGTGCGC
CGGGTCGGGC TGTATCTGCG CGAGAGTTTT CCGGTTCTCG AGGAGACCGC GACCCCCGAA
CAGGCCACGG CTGAGGCTCG GGTGGCGGAG ATTGAGGACC AGATAGATGC GCTGCGCCAG
ACCGCAGAGG AGGCGCGACT GGCGGCGCAG GGCGCCGAGG CAGCGATCGC CTTTCTGAGT
GCCCTTAACC GGGGCGAGGG AGCGGCACTG CCCGACCCCG ATCAGTTGCG CGCACTGGTG
AGCACGGTGC GCGAGGAAAC CTCCGAGGCA CGCGAGACCA TTTTGCGGGC CAAAGCGCAG
GAGCGCGGGT TTCAGCGCCA GATGAAGGAT CTCGAGGCCG AGCTGGCCCG GGCGCAGGCG
GAGCTTCGGG CGCTGTCGCA GCAGGATGAA GAACAGATGT TCCTCGCACT GGATGTCGAG
GCGGATGAAG AAGTGACGGT ACCGCTCAGC CTAAGCTACC CCAATGATGC GGTGTCATGG
GGGCCGTCTT ATGCGTTCAA TCTGCAAACA GGCACCTCGC CAGAGGTCAC TTTGCGCCGG
GATGTGATGA TCCAGCAGGC CACTGGCGAG GATTGGGTGG ATGTGGCGCT GCGGGTCTCG
ACCTCGACCC CGGATCAGAG GATCAACCCA CATGACCTGC GTCCCAATCG GCGTTGGATC
GAGGACGAGC AACAGGCCAA ACAGCGTTTC ACCTCAGAAA GCCGGGTGAT GAGCGCCGCC
GAGCCGATCG TCGAGGCCCC GATCATCGTC GAGGACACAG GTGCCTCCTT TGGTGTCGTC
GCCAGCGAGG CAGGGGTTTC TTACAGCTTT GATGTGCCTG TCAGCCTGCG CTCGGGGGCG
GAGTTGGCCT ATCTCACCCT GCCGGATGTC ACGTTTGAGG CTGAGGTCTT TGCCCAGGCC
GTGCCACGCC GCGATCCGAC CGCCTTTCGC ATTGCGCGCA TCGTGAACAC CAGTGGCGAG
GAGCTGTTGG CAAGTTCGAC CACGCGCTAT TTTGTTGATG GCGACCTTGT TGGATCTGGG
CATTTCGCGG GGCTCACGCC CGACGCCGAG CTCGATCTGG GTTTTGGCCC GATTGATGGC
CTGCGCCTCA AACGGGACCT TCTGGATCAG AGCGAAGGTG GGCGCGGCGT GATCTCGCGC
AGCAACCAGC GCGATATGGT GGCCGAGATC GAGGTGGAGA ACCTGACCGG TCAGGACTGG
CCGCTGCGCG TTCTTGATCT GGTGCCCTTC AGCGATCAGG AGGATCTGGA GATCACATGG
TCTGCAACGC CCGCGCCCTC CGAGGAAAAC GTCGACAAAC AGCGCGGAAT CCTCGCCTGG
GATCTCGATG TGTCGGCAGG AAAGACGCGC ACCATCAGCC TCAAGACCCG CCTGAGCTGG
CCTGAGGGCA TGGTCCTGCG CTGA
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| Protein sequence | MRFVLSSVLV GAAALLSTTA LAETFTAASR VSAVTVYPSE ALMTRTAEVT LPAGRHRIII
TGMPFVDEVE TLQVTHPGVR RVGLYLRESF PVLEETATPE QATAEARVAE IEDQIDALRQ
TAEEARLAAQ GAEAAIAFLS ALNRGEGAAL PDPDQLRALV STVREETSEA RETILRAKAQ
ERGFQRQMKD LEAELARAQA ELRALSQQDE EQMFLALDVE ADEEVTVPLS LSYPNDAVSW
GPSYAFNLQT GTSPEVTLRR DVMIQQATGE DWVDVALRVS TSTPDQRINP HDLRPNRRWI
EDEQQAKQRF TSESRVMSAA EPIVEAPIIV EDTGASFGVV ASEAGVSYSF DVPVSLRSGA
ELAYLTLPDV TFEAEVFAQA VPRRDPTAFR IARIVNTSGE ELLASSTTRY FVDGDLVGSG
HFAGLTPDAE LDLGFGPIDG LRLKRDLLDQ SEGGRGVISR SNQRDMVAEI EVENLTGQDW
PLRVLDLVPF SDQEDLEITW SATPAPSEEN VDKQRGILAW DLDVSAGKTR TISLKTRLSW
PEGMVLR
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