| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3425 |
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| Symbol | |
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| ID | 4075599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 448036 |
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| End bp | 448977 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638004934 |
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| Product | hypothetical protein |
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| Protein accession | YP_611659 |
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| Protein GI | 99078401 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.143139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.528642 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATC TGACCGTCAA GCCCTATGAC GCGTCCGAGG CGGACGCATG GAACGCCTTT
GTCGCGGCGT CGCGCAATGG CACTTTTTTG CATGACCGCC GCTTCATGGA GTACCATGCA
GACCGGTTTC ATGATGCATC GCTCGTGGTG AAGCGCGCGG GAAAAGTGCT GGCGCTGCTC
CCTGCCAACC GTAGCGAGAC ACAAGTTGTC TCTCACGGCG GCCTTACCTA TGGCGGTGTG
ATTGTCGGAA ATGACATGCG CACAGGTTTG ATGTTGGAGA CCATGGCGGC AATCAGCGCG
TATTTGCGCC AGACCGGCGC CACCCAACTG ATTTACAAGC CAACACCGCA TTTCTATCAC
AGCGCCCCAG TAGAGGAAGA TCTCTATGCG CTGTCACGTC TTGGCGGACG CTTGATCCAG
ACCGATGCCT CTGCCGCTAT TCCCCTCTCC CGCCGCCCAA AGGAATCCCA ATCCCGGCGT
CAGGCCGCAA AACGCGCCGC CAAAGAGGGC TTTGTCGTTT CGGAAACGCA GGACTGGTCT
GCGTTCTGGG GTATATTGAC TGATGTTCTG GCCGAACGAC ATGAGGCTGC GCCCACCCAC
TCGTTGGCAG AGATTGAGCA GCTTGCCCAG AGTTTTCCGA GTCGCATTCG CTTGTTTGGC
GCGATGCAAG GCAACACCAT GCAGGCAGGT GTCGTGAGCT TTGACTGCGG GCGCTGCATC
CATATTCAGT ACATCGCAGG CAACCCCGAA GGGCGGGCGG CAGGTGCGAT CGATGCGATT
ATCCTGCACC TGATCCAATC CGTTTTTGCC GATCGCGACT GGTTTGATTT TGGCATCTCA
ACCACCGAAG GGGGGGCTGT CCTAAATCCG GGCCTTGCAC AACAAAAAGA AATGTTTGGC
GCGCGCTGCG TGATATATCA ACGCTACGCT CTGGATCTCT GA
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| Protein sequence | MTDLTVKPYD ASEADAWNAF VAASRNGTFL HDRRFMEYHA DRFHDASLVV KRAGKVLALL
PANRSETQVV SHGGLTYGGV IVGNDMRTGL MLETMAAISA YLRQTGATQL IYKPTPHFYH
SAPVEEDLYA LSRLGGRLIQ TDASAAIPLS RRPKESQSRR QAAKRAAKEG FVVSETQDWS
AFWGILTDVL AERHEAAPTH SLAEIEQLAQ SFPSRIRLFG AMQGNTMQAG VVSFDCGRCI
HIQYIAGNPE GRAAGAIDAI ILHLIQSVFA DRDWFDFGIS TTEGGAVLNP GLAQQKEMFG
ARCVIYQRYA LDL
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