| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3412 |
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| Symbol | |
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| ID | 4075586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 433541 |
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| End bp | 434764 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638004921 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit F |
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| Protein accession | YP_611646 |
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| Protein GI | 99078388 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF |
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| TIGRFAM ID | [TIGR01941] NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0792891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.513538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTACAT TCGGACTAGG CGTTCTCCTG TTCACTTTGA TCGTTGTTGC ACTGGTGACG
ATCATTCTGG CGGCGCGTTC CAAGCTCGTC AGCTCGGGCA ACGTCAACAT CACCATCAAC
GGTGAGAAAA CCATCTCTGT TCCGGCGGGC GGCAAACTGC TGCAAACGCT GGCAGCCGAG
AAAATGTTCG TCCCCTCCGC CTGTGGCGGG GGTGGCACCT GTGCGCAATG CCGCGTGCGT
GTGCATTCCG GTGGCGGGTC GATCCTGCCC ACCGAAGAAA GCCACATCAC CAAGCGCGAA
GCCTCTTGTG GTGACCGCCT GTCCTGTCAG GTGGCCGTGA AGCAGGACAT GGACATCGAA
GTGCCCGAAG AGGTGTTCGG CGTGAAAAAA TGGGAGTGCA CCGTGCGCTC CAATGAAAAC
GTCGCAACCT TCATCAAGAA CCTGGTACTG GAACTGCCCG AGGGCGAGGA TGTAAACTTC
CGCGCAGGGG GCTATATCCA GATCGAGGCT CCGGCACACA AGCTGTCCTA CAAGGACTTC
GACGTCGAGG AAGAGTACCG CCCCGATTGG GACAAGTTCA ATCTGTGGCA GTATGAATCG
ACTGTGACCG AACCCATTGA ACGTGCATAT TCTATGGCCA ACTACCCGGA CGAAAAGGGC
CTTATCATGC TCAACGTCCG TGTTGCGTCG CCGCCGCCGG GCTCCACCGG CATTCCGCCC
GGCCAGATGT CTTCGTATAT CTTCAACCTG AAGCCCGGTG ACAAGGTCAC CATCTCCGGC
CCGTTTGGCG AATTCTTTGC GCGCGACACC CAAAAAGAGA TGGTCTTTAT CGGCGGTGGT
GCGGGTATGG CGCCGATGCG CAGCCACATC TTTGACCAGC TCAAGCGTCT GGAGAACCGT
GATCGCAAGA TCACCTTCTG GTACGGGGCA CGCTCCAAAC GGGAGATGTT CTTTGTCGAG
GATTTCGACC AACTGGCCGA AGAATTTGAC AACTTCGAGT GGCATGTGGC GCTCTCGGAC
GCGCTGCCAG AGGACGACTG GAAAGGCTAC ACCGGCTTCA TCCACAACGT GCTCTACGAG
GAATACCTCA AGAACCACCC GGCGCCCGAG GACTGCGAGT TCTACATGTG TGGTCCGCCG
ATCATGAACC AATCGGTGAT CAACATGCTC TTGGAACTGG GCGTGGATCG CGAAGACATC
ATGCTCGACG ACTTCGGCGG GTAA
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| Protein sequence | MTTFGLGVLL FTLIVVALVT IILAARSKLV SSGNVNITIN GEKTISVPAG GKLLQTLAAE
KMFVPSACGG GGTCAQCRVR VHSGGGSILP TEESHITKRE ASCGDRLSCQ VAVKQDMDIE
VPEEVFGVKK WECTVRSNEN VATFIKNLVL ELPEGEDVNF RAGGYIQIEA PAHKLSYKDF
DVEEEYRPDW DKFNLWQYES TVTEPIERAY SMANYPDEKG LIMLNVRVAS PPPGSTGIPP
GQMSSYIFNL KPGDKVTISG PFGEFFARDT QKEMVFIGGG AGMAPMRSHI FDQLKRLENR
DRKITFWYGA RSKREMFFVE DFDQLAEEFD NFEWHVALSD ALPEDDWKGY TGFIHNVLYE
EYLKNHPAPE DCEFYMCGPP IMNQSVINML LELGVDREDI MLDDFGG
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