| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3402 |
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| Symbol | |
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| ID | 4075576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 421630 |
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| End bp | 422220 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638004911 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_611636 |
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| Protein GI | 99078378 |
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| COG category | [K] Transcription |
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| COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
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| TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0776378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAAA CACCAGAGCC CCAACTGGAC CGAGAGTTGA AGGCGTTGCC CCCGGACCAG
CGCTGGTATG AATGGTTGCG CCGAATTGAA GCGGTATTGT TTGCCAGTGC CACACCGGTG
TCCCGAGAGG CTCTGGCGCG CGTAGTGGGG CAGGGGGTCT CTGTCGAACT TCTGATTGAC
GATTTATCGG CTGAACTCGA AAGCCGGTCG TTTCAGGTCG CCCATGTTAA GGATGGTTGG
TTTCTGCGTA CCCGCAGTGC CTACGCCTCC GCCATTCGCG ACGCACAAAG CGCGGGCCAT
CAGGTGATGG ATCTAAACGC CTTTGATGTC GCTGTTCTGG CGGCCATCGC CTACCACCAG
CCGATCACGC GAGAAGGGTT GAAAGACATC TTTGGCAAGG ACATCAGCCG TGATTTGATC
GGACGTCTGC ACGATCGCGG ACTGATTGGA AACGGGCCGC GCGCGCCGCG GCGGGGCGCG
CCCTATACCT TTGTCACTAC CGATCAGTTT CTGCTCGCGT TCGATCTAGA AACCCTACAG
GATCTTCCGG ATCGTGAACG GCTGGAGGAT GCAGGATTGG CGCGGGGCTA A
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| Protein sequence | MRKTPEPQLD RELKALPPDQ RWYEWLRRIE AVLFASATPV SREALARVVG QGVSVELLID
DLSAELESRS FQVAHVKDGW FLRTRSAYAS AIRDAQSAGH QVMDLNAFDV AVLAAIAYHQ
PITREGLKDI FGKDISRDLI GRLHDRGLIG NGPRAPRRGA PYTFVTTDQF LLAFDLETLQ
DLPDRERLED AGLARG
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