| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3400 |
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| Symbol | |
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| ID | 4075574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 419964 |
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| End bp | 420770 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638004909 |
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| Product | IclR family transcriptional regulator |
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| Protein accession | YP_611634 |
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| Protein GI | 99078376 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.279316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.966908 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAA CCGCCGACAA ATACCGCGCC CCGGCCCTTG AAAAAGGGCT CGATATCATT
GAGTTGCTTG CAGATTACGG CGACGGGCTG GCCCAGGGCG ACATCGCGCG GGCGCTGGAT
AGATCGCAAA GCGAGATCTA CCGCATGCTC ACAACTTTGG TGCGCCGCGG ATATGTCGTG
CGCTCTCCCG GCGATGATCT CTATACGCTC AGCCTCAAGA TGTTTGCCCT CTCACAGCGC
CACCCGCCGA TCGGTCGGCT CTTGGAAACT GCAGCGCCGC AAATGCGTAT GCTCACGCGC
AAGGCCTGGC AGTCCTGCCA CCTCGGCATG GAAAGCAACG GCGATGTCGT GATCGTCGCC
TCGGCTGAAT CGCCCGGGAA CTGGGGATTG GCCCTGCGTG TTGGGACCGT CATTGGCCTC
GGCAACACTG GCACCGGCCG GGTTCTGGCA GCATTTCGTC CAGAAGACGA ATTGTCCGAT
CTCGTCGCGC AGCATCGTCT CGCCGTGGGC GAACCGCCGA TCGACGCCTT CGAACTCAGG
GATCACATCG CCAGAATTCG CGAGCTGGGC TATGAACGGA TGCCCTCTGC CACCGCTGTA
GGCGTCACCA ACCTGTCCTA CCCAGTGTTG AACCAGGACG GCCGCGCGAT TGCCGTGCTC
ACCTGCCCGT TCCTCGAGCG CATTGACGAC ATGAAACCTC CGTCTCAGGA CGAGGTACAT
CGTATGTGCA AAGCACTGGC CGAGGATTTG ACCGCGTTCT ATTGTGGCAC CGGCGACCGC
ACGCTCTTTG AAGGTCTCGA GCCGTGA
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| Protein sequence | MTQTADKYRA PALEKGLDII ELLADYGDGL AQGDIARALD RSQSEIYRML TTLVRRGYVV
RSPGDDLYTL SLKMFALSQR HPPIGRLLET AAPQMRMLTR KAWQSCHLGM ESNGDVVIVA
SAESPGNWGL ALRVGTVIGL GNTGTGRVLA AFRPEDELSD LVAQHRLAVG EPPIDAFELR
DHIARIRELG YERMPSATAV GVTNLSYPVL NQDGRAIAVL TCPFLERIDD MKPPSQDEVH
RMCKALAEDL TAFYCGTGDR TLFEGLEP
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