| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3380 |
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| Symbol | |
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| ID | 4075279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 395104 |
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| End bp | 396009 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638004888 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_611614 |
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| Protein GI | 99078356 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.53239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTCA AAATCGAAAT GCTCCGTGGT TTTGCCACCG TTGCCCGAAG TGGAAACCTG
AGTGATGCGG CTCAGGTGTT GGGACGTACG CCCTCAGCTG TCTCCATGAT GCTGAAGCAG
TTGGAGACGC ATTTGGGTGA GCCGCTGTTT GAAACCGACC GCAAAAGCAA GTTGACCGCA
CTGGGTGCGT TTGTGCTGGA GCAGGCCGAG CGCGAGTTGC AGCAGTTTGA CAATATGGTC
CGAGCGATCG AGGGCTTCGC CAAGGCCACG CATGGCCATG TGCGCATAGC CACTGTGCCC
TCTGTGGCCG GTACGATCAT CCCCCAGGTT TTTTCACGCC ATATCAACGA CTACGTGAAT
GTCGACATTG AGCTGCGCGA TATGGATTCT CATTCCATTC TCCATGAGCT GTCCCGTGAT
CGGATCGACA TCGGTATCGC GACTCTGGGA CAGCAAGGCG CCGGACTAAG CAGCCAGCAT
CTTCTGTCTG ACACCTTTGG GGTGATCTGC GCACCTTCGC ATGAACTGGC GGACAGCACC
GGTCCCGTCA CATGGGAGGC ACTAGCCGAT GAACGGCTCA TTGCGAATTC TCTTTCGGCT
GGGATAAGTG CCGCGGCTTC GGTCGCGTTA CACGATCGGG CGATGCTTTC GGCCCACAAC
CTCACTTCGA TCCTTGGGAT GGTGCAGGCC AACATCGGGA TCACGATTCT GCCTGAAATG
GCGGTTCGAG CCTCAAATTC GGCAGGGCTC GTGTTCCGTC CACTCACGGA GCCGCATGCA
AAACGGGAAA TTCACATGTT GCGGCGAGCG GATTCGAATC AATCTCCTGC GGCGCGCTTG
CTAGAGCGGC ACATTCTGCA AATCGCGAAA GAGATTTCGC GGGACACGGT GATGAGGCAC
TCCTGA
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| Protein sequence | MALKIEMLRG FATVARSGNL SDAAQVLGRT PSAVSMMLKQ LETHLGEPLF ETDRKSKLTA
LGAFVLEQAE RELQQFDNMV RAIEGFAKAT HGHVRIATVP SVAGTIIPQV FSRHINDYVN
VDIELRDMDS HSILHELSRD RIDIGIATLG QQGAGLSSQH LLSDTFGVIC APSHELADST
GPVTWEALAD ERLIANSLSA GISAAASVAL HDRAMLSAHN LTSILGMVQA NIGITILPEM
AVRASNSAGL VFRPLTEPHA KREIHMLRRA DSNQSPAARL LERHILQIAK EISRDTVMRH
S
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