Gene TM1040_3372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3372 
Symbol 
ID4075271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp385946 
End bp386266 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content57% 
IMG OID638004880 
Productresponse regulator receiver protein 
Protein accessionYP_611606 
Protein GI99078348 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.457029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.363016 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAAG ACCTGCGATG TGTGCCTACG CTCGCGACCG ACGCCCGTGC CGCACTCGGG 
GTGTTGGAGC AGGACGGGTT TGATATGATC GTGAGTGATT TCAAGATGCC CGGCATGAAT
GGTGCGGAGT TCTACGATGC CCTTCTCAAC CGACATCCAC AGTATGCGGA CAGGGTCGGA
TTCGTGACCG GCGATGCACT CAGCGAGGAC ATCTTTCGTT TTCTATCCAA AGTCGGACGA
CCCCACATCG AAAAGCCAAT CCTGCGCGAT GACCTCTCCG CGCTCCTTGA GCGCCTGACG
TGCAAAGGAG TGAACGGATG A
 
Protein sequence
MLEDLRCVPT LATDARAALG VLEQDGFDMI VSDFKMPGMN GAEFYDALLN RHPQYADRVG 
FVTGDALSED IFRFLSKVGR PHIEKPILRD DLSALLERLT CKGVNG