Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3372 |
Symbol | |
ID | 4075271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 385946 |
End bp | 386266 |
Gene Length | 321 bp |
Protein Length | 106 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638004880 |
Product | response regulator receiver protein |
Protein accession | YP_611606 |
Protein GI | 99078348 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.457029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.363016 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGAAG ACCTGCGATG TGTGCCTACG CTCGCGACCG ACGCCCGTGC CGCACTCGGG GTGTTGGAGC AGGACGGGTT TGATATGATC GTGAGTGATT TCAAGATGCC CGGCATGAAT GGTGCGGAGT TCTACGATGC CCTTCTCAAC CGACATCCAC AGTATGCGGA CAGGGTCGGA TTCGTGACCG GCGATGCACT CAGCGAGGAC ATCTTTCGTT TTCTATCCAA AGTCGGACGA CCCCACATCG AAAAGCCAAT CCTGCGCGAT GACCTCTCCG CGCTCCTTGA GCGCCTGACG TGCAAAGGAG TGAACGGATG A
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Protein sequence | MLEDLRCVPT LATDARAALG VLEQDGFDMI VSDFKMPGMN GAEFYDALLN RHPQYADRVG FVTGDALSED IFRFLSKVGR PHIEKPILRD DLSALLERLT CKGVNG
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