| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3333 |
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| Symbol | |
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| ID | 4075232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 342686 |
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| End bp | 343723 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638004841 |
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| Product | thiosulphate-binding protein |
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| Protein accession | YP_611567 |
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| Protein GI | 99078309 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4150] ABC-type sulfate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00971] sulfate/thiosulfate-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.885845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.45738 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTCT CCTCCAAACC GTTTCTCCGG TCCTCTCGGG TTCTGGTTCG CAGCCTCGGT
GCTGCCGCGA TCGCGCTTGC TGGTTTTGCG AGTTCGGCCG AAGCCGAAGA GCAGGAAATC
CTCAATGTTT CCTACGATAT TGCCCGTGAA CTCTACGCGG CGCTGAACCC TGTTTTTGCC
GAAAACTGGC AGGCAGAGAC GGGCGAGACA CTGACCATCA AACAAAGCCA TGCTGGCTCT
TCCAAACAGG CTCGAGCGAT CCTGCAAGGT CTGCAGGCGG ATCTCGTGAC CTTCAATCAG
GTGCTGGATG TGCAGATCCT CGCAGACAAG GGTTTTGTGG CGCAGGACTG GCAGCAAAAG
CTGCCCAATA ACGCATCGCC TTACTACTCG CTCCCGGCTT TCCTGGTGCG GGGTGGCAAC
CCCAAGGGTA TTGAAGACTG GGACGATCTG ACCCGTGATG ACGTGGAACT CGTGTTCCCG
AACCCAAAAA CCAGCGGCAA TGCGCGCTAC ACCTATCTCG CGGCCTACGC CTATGCGCTT
GACAAGTTTG GAGGCGATGA GGCCGCGGCG CAGGAATTTG TCGGTAAGAT CCTCTCCAAT
GTCGTGGTGT TCGACACCGG TGGGCGTGGT GCGACAACGA GCTTTGTCGA GCGTGAGCTT
GGCGATGTGC TGATTACCTT CGAGGCCGAG GTCGAGAACA TCCGCGCCAG TGAGGATGAA
GGTGCCTTTG ATCGTGTGGT GCCTGCAATC TCCCTCTTGG CAGAGTTCCC TGTGGCGCTG
GTTGACAAGG TGGCAGATGC ACGGGGCAGC CGAGCCGTTG GCGAGGCCTA TCTCGACTTT
CTCTACTCCA AGGACGCGCA GGAAGTCATT GCCGGTTTCA ACAACCGTGT GCATCACCCC
GAGGTGGTGG CTGCAACAGC CGACAAGTTC CCTGATGTGC GTCTGATCAC GGTCGAAGAA
GTCTTTGGCA GCTGGGCCGA AGCGCAGGAG ACCCACTTTG GCGAGGGTGG TACGCTCGAC
CGGGTCTTCA CCAACTAA
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| Protein sequence | MPLSSKPFLR SSRVLVRSLG AAAIALAGFA SSAEAEEQEI LNVSYDIARE LYAALNPVFA
ENWQAETGET LTIKQSHAGS SKQARAILQG LQADLVTFNQ VLDVQILADK GFVAQDWQQK
LPNNASPYYS LPAFLVRGGN PKGIEDWDDL TRDDVELVFP NPKTSGNARY TYLAAYAYAL
DKFGGDEAAA QEFVGKILSN VVVFDTGGRG ATTSFVEREL GDVLITFEAE VENIRASEDE
GAFDRVVPAI SLLAEFPVAL VDKVADARGS RAVGEAYLDF LYSKDAQEVI AGFNNRVHHP
EVVAATADKF PDVRLITVEE VFGSWAEAQE THFGEGGTLD RVFTN
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