| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3314 |
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| Symbol | |
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| ID | 4075719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 323052 |
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| End bp | 323840 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638004822 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_611548 |
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| Protein GI | 99078290 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.147455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.710727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACGAC TGCCTCATCT CTTATCACTC ATGGTCACGC TGCTGGCCTG CGCCTTCTTG
CTGGTGCCCA CGGTGCAATC GGTGCTCGCG GGGCTGACCG CCAACTACTT CCGTGGCCTT
TCTTCGGGTC TTACACTCAA ATGGGTGGCT GAGGTCTGGA CGCTTTATGC AGACAGTATC
TTTCTCTCCA TCTGGCTCGC TGTCGCATGC CTTGTGATGA CGCTGATCCT GGGCGTGCCC
GCAGCCTATG CGCTGGCCCG AAATCCCGGC CGACTGTCGC GTATCCTGGA AGAGTTCATT
TCCCTGCCGC TGGCCGTGCC GGGGCTGGCG CTCGCACTTG CGCTCTTGCA GCTCTACGGC
GCGCAGCAGG GGTTTCGCGC GCATTGGAGC TTTATCCTTG TCGGGCATGT TCTTTACACC
CTGCCCTTCA TGGTGCGCGC GGTGCAGGCT GTGCTGGCTG CAATCGACCT CAAGACGCTT
GAGGAAGGGG CGGCATCTCT TGGCGCAGGG CCGGCGCGGC GCTTTGTCGA TATTGTGGTT
CCCAACGCTC TGCCCGGTAT TCTTGCCGGG AGCCTCACGG TCGTCACACT CTCTATCGGA
GAGTTCAATC TCACATGGAT GCTTCACACG CCGCTTTTAA AAACCCTGCC TGTAGGGCTT
GCGGATTCCT ACGCCTCGAT GCGGCTGGAA ATCGCCTCCG CCTATACACT GGTCTTTTTC
GTGATGATCG TCCCGCTTCT GATGGCGATG CAATGGGCCT CTGCCCGCGC CCAAAGGATA
CTGTCATGA
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| Protein sequence | MRRLPHLLSL MVTLLACAFL LVPTVQSVLA GLTANYFRGL SSGLTLKWVA EVWTLYADSI
FLSIWLAVAC LVMTLILGVP AAYALARNPG RLSRILEEFI SLPLAVPGLA LALALLQLYG
AQQGFRAHWS FILVGHVLYT LPFMVRAVQA VLAAIDLKTL EEGAASLGAG PARRFVDIVV
PNALPGILAG SLTVVTLSIG EFNLTWMLHT PLLKTLPVGL ADSYASMRLE IASAYTLVFF
VMIVPLLMAM QWASARAQRI LS
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