| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3306 |
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| Symbol | |
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| ID | 4075710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 314042 |
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| End bp | 315049 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638004814 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_611540 |
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| Protein GI | 99078282 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0498492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.505135 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCCAG CCATTCAAGG GCTGCTGACC ATCGCTTTCG GCGTCGGGGG CTGTGTCGGC
TATTTCTACC TCTCGAATAT CATCCTCGAC ACCTTTGTTT TCCCCGCCCG AGGCAAGGAC
ATTGCCAAGA ATATCCGCCG CGCCAACATG GTGCGCCCAT GGCTCTTTTT GCTGCCTGCG
CTTCTCGCCC TGGGGCTCTA CCTCGCTTAT CCGGTGTTTG AGACAATCCG TTTGTCCCTC
ACCGAGCGGG TGCCCGGTGG TGGCTCGGAG TTTGTCGGGC TCGACAACTA CAAGCAGATG
CTCGCAGAGG CAAAGTTCTG GGAGGCGCTG CAGAACAACT TCCTCTGGCT TCTGGTGGTG
CCTGCGGCCT CTACCGCCTT TGGTTTGCTG GCAGCGCAGC TCACCGATCG GTTGGCTTGG
GGAAATATCG CTAAGTCATT GATTTTTATG CCAATGGCGA TCTCCTTTGT GGGCGCTGCG
GTGATCTGGA AGCTCGTTTA TGACGCCCGC CCGCCGGGCA CCGAGCAAAT CGGCATTCTC
AATGCGATCT ATATCTGGCT CGGTGGCGTT GAACCCCAGC AATGGTTGAC GATCCCGTTC
TGGAACAACT TCTTCTTGAT GATGGTTCTG GTTTGGATTC AGACCGGCTT TGCCATGGTG
ATCCTGTCGG CAGCCCTGCG CGGTATCCCC GAAGAAACCG TCGAGGCCGC CATCGTGGAT
GGTGCCGGAC CCTTTCAGAT CTTCTTCAAG ATCAAAGTGC CGCAGATCAT GGGCACCATC
GTCGTGGTCT GGACTACGAT TACAATCGTG GTGCTCAAGG TCTTTGACAT CGTGTTTGCG
CTGACCAATG GCCAGTGGGA GACGCAGGTT CTCGCCAATT ATATGTATGA CAAGCTGTTC
CGGGCGAATG ACTGGGGCGT GGGATCGGCT TCGGCCATGG TGATCATGCT TCTGGTGATG
CCGATCCTGG TTTGGAACGT CTACAACGCA CGTCGCGAAA TGCGCTGA
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| Protein sequence | MHPAIQGLLT IAFGVGGCVG YFYLSNIILD TFVFPARGKD IAKNIRRANM VRPWLFLLPA
LLALGLYLAY PVFETIRLSL TERVPGGGSE FVGLDNYKQM LAEAKFWEAL QNNFLWLLVV
PAASTAFGLL AAQLTDRLAW GNIAKSLIFM PMAISFVGAA VIWKLVYDAR PPGTEQIGIL
NAIYIWLGGV EPQQWLTIPF WNNFFLMMVL VWIQTGFAMV ILSAALRGIP EETVEAAIVD
GAGPFQIFFK IKVPQIMGTI VVVWTTITIV VLKVFDIVFA LTNGQWETQV LANYMYDKLF
RANDWGVGSA SAMVIMLLVM PILVWNVYNA RREMR
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