| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3256 |
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| Symbol | |
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| ID | 4075398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 257295 |
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| End bp | 258170 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638004765 |
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| Product | allophanate hydrolase subunit 1 |
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| Protein accession | YP_611492 |
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| Protein GI | 99078234 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2049] Allophanate hydrolase subunit 1 |
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| TIGRFAM ID | [TIGR00370] conserved hypothetical protein TIGR00370 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.350388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.431322 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGC GCTATACCTA CGGAGGGGAC GAACATGTCT ACGTCGAGAT CGACGATGAG
ATGTCTCTCG ACGCCTTCTT TATCGCGCTC TCGCTGTCCA AACTGGTGCG CGAGGCCAAT
ATTCCGGGCG TCACCGAAAT CTGCCCGGCC AATGCTTCGT TTGAGGTGCG CTTTGATCCC
GATGTGATCG CGCCGGACGA GATGATGGCC CGCATTCGGG AACTCGAAGG CGCAGCCAAA
GCGCAAGAGA AACGTCTCGA CACACGGATT ATCGAGATCC CGGTGTTTTA CGAAGACCCC
TGGACGCATG AGACCCTGAT GCGGTTTCGC GAGCGGCATC AGGACCCCTC TGGCACCGAT
CTGGATTATG CGGCGCGGAT CAACGGGTAT GACGATGCTG CGGCCTTCAT CGAGGCGCAT
CATTCCCAAC CGTGGTTCGT GTCTATGGTA GGTTTCGTCT CAGGTCTGCC CTTCCTCTAT
CAGCTGGTCG AGCGCCAGAA ACAGCTGGAG GTACCCAAAT ACCTGCGCCC CCGCACCGAT
ACGCCCAAGC TCACGGTCGG CTATGGGGGC TGTTTTTCCT GCATTTACTC CGTGCGTGGG
GCAGGCGGTT ACCAGATGTT CGGGATCACC CCGATGCCGA TCTTCGATCC CGAGCAGAAG
ATCAGCTATC TCAAGGACTT CATGGTTTTT TTCCGCCCCG GTGACATCGT CAAATGGAAG
CCGATCGACC GCGCAGAGTA TGACGCGATT ACCGCGCAGG TCGAAGCAGG CAGCTATGTG
CCAAAGATCG CAGAGGTCGC CTTTGATCTC GATGCCTTCA ACAAGGACAT GACCGGTTTC
AACGCCAAAC TGATGGAGGC CCTCAATGAC GCTTGA
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| Protein sequence | MKTRYTYGGD EHVYVEIDDE MSLDAFFIAL SLSKLVREAN IPGVTEICPA NASFEVRFDP
DVIAPDEMMA RIRELEGAAK AQEKRLDTRI IEIPVFYEDP WTHETLMRFR ERHQDPSGTD
LDYAARINGY DDAAAFIEAH HSQPWFVSMV GFVSGLPFLY QLVERQKQLE VPKYLRPRTD
TPKLTVGYGG CFSCIYSVRG AGGYQMFGIT PMPIFDPEQK ISYLKDFMVF FRPGDIVKWK
PIDRAEYDAI TAQVEAGSYV PKIAEVAFDL DAFNKDMTGF NAKLMEALND A
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