Gene TM1040_3249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3249 
Symbol 
ID4075391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp251153 
End bp251410 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content56% 
IMG OID638004758 
Producttransposase orfB 
Protein accessionYP_611485 
Protein GI99078227 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0121923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAGCGC CCAAACGGGC GGAGCCCCCA TGGCTCAATG ATGGGTCGTG CCTTCGACTA 
CGACCGGAAC GCCGCGATCA TGTATTGAGC TATGACTTCG TGCATTGCCG CACGGAAGAC
GGAAAGGCGT TCCGTACGCT CAACATCGCC GATGAATACA GCAGAGAATG CTTGGCGATC
CGCGTCGACA GGAAGCTGAA CTCAGGCAAC GTCATTGGTG TGATGAACAA CCTGTTCACC
CTGCGCGGTT TATCGTAA
 
Protein sequence
MQAPKRAEPP WLNDGSCLRL RPERRDHVLS YDFVHCRTED GKAFRTLNIA DEYSRECLAI 
RVDRKLNSGN VIGVMNNLFT LRGLS