| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3225 |
|---|
| Symbol | |
|---|
| ID | 4075367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008043 |
|---|
| Strand | - |
|---|
| Start bp | 222584 |
|---|
| End bp | 224017 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638004734 |
|---|
| Product | von Willebrand factor, type A |
|---|
| Protein accession | YP_611461 |
|---|
| Protein GI | 99078203 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACATA AAATCATGAC AGCCGCCATC TGTGCCGCAC TCGCCGCGCC TGTTGCTGCG
CAAGACCTGA CCCGCAGTAC TTTGGTGTTG GATGCCTCTG GGTCGATGTG GGGACAGATT
GACGGTGTTG CCAAGATCAC CATCGCTCAG GACGTGATGC AGCACCTTCT AAAGACACTC
CCAGAGAACC AAGAGCTCGG CCTGATGGCC TATGGACATC GGCGCAAAGG CGATTGCAAC
GATATCGAAC AGTTGATCGC CCCTGCCGCA GGATCTCGGC AGGCCATTTC ACAGGCGGTC
ACGCAGATCA GTCCAAAAGG CAAGACACCG CTCTCTGCGG CGGTGATGCA AGCCGCTGAC
GCTTTGCGAT CCAGTGAGGA GAAAGCAACC GTCATCCTCA TCTCGGATGG CGAGGAAACC
TGTGGGCTTG ATCCTTGCGC AGTTGGCGCA GAACTCGAAG CGCGCGGTGT GGACTTTACC
CTGCATGCGA TTGGCTTCGG CATCGCGGAT GACGCAGCGC GCGCGCAGTT GCAGTGCTTG
GCTGAGAACA CCGGAGGTTT CTACCGGGAC GCGTCGAGCG CATCTGAATT GACGGCGGCT
TTGGCACAGG TAGCGGTGAC CACATCCACG CCCGACCCGG CATCGGCTAC TTTGGTAGGG
CCTGCTACGG CACAGGCGGG TCGGACCATC GACATCATCT GGCAGGGCCC TGGCGAGGAA
GGCGACTGGA TCGGGACCTT GGCCCCCGGC GCCGATGTCG GTGCATTTTC CTCACGCATT
GGGGTCGAGC ACGGCAACCC TGCGCCGATG CCAACCCCGC CGCAGGCGGG CACCTACGAG
ATCGTCTATG TGCGCGCCGA AACCGGAGCC GTCCTTGCGC GCGCGCCGCT TGAAGTAACG
CCCATGGTCG CGTCGGTCAC AGCGCCATCT ACGGGTCTCA CGGGGGGGAC TGTGACGGTC
ACATGGCAAG GGCGCGGATC AGAGAAAGAC TTTATCGGCA TCGCCCCAAA GGCCGAGGGT
TTCCCGGCGA CCACCTTCTA TTTCGAGACC ACTGGACCAG AACAGCAGGC TTTGCGCCTG
CCATCGCAGC CGGGCGACTA CGAGATCGTT TTTGTTGCCA CGACCGATCC ATGGACCGTG
CTTGATCGCA CCTCGATCAC ATTGTCAGAT CCGGATTTGT CGCTGAAAGC GCCAAGTCAA
GTGGCTGCAG GCCAGGACTT TGCCGTGTTG TGGAACGGGA TCGCGCCAAA CCCTGCGGAT
TATATCGCGC TTGCCAGGGC CGGAGACGAC CTGCCGCATC TCGTCAGCTA TGCGCATACC
GAAAGCCACC TGACCCGCCT GACCGCGCCA GAGGAGGCCG GTGCCTATGA GTTGCGCTTC
TTCTATGCCG AAGGCGACCG CATCGTGACC GCTCAGCCGA TCATCGTCGA CTGA
|
|---|
| Protein sequence | MQHKIMTAAI CAALAAPVAA QDLTRSTLVL DASGSMWGQI DGVAKITIAQ DVMQHLLKTL
PENQELGLMA YGHRRKGDCN DIEQLIAPAA GSRQAISQAV TQISPKGKTP LSAAVMQAAD
ALRSSEEKAT VILISDGEET CGLDPCAVGA ELEARGVDFT LHAIGFGIAD DAARAQLQCL
AENTGGFYRD ASSASELTAA LAQVAVTTST PDPASATLVG PATAQAGRTI DIIWQGPGEE
GDWIGTLAPG ADVGAFSSRI GVEHGNPAPM PTPPQAGTYE IVYVRAETGA VLARAPLEVT
PMVASVTAPS TGLTGGTVTV TWQGRGSEKD FIGIAPKAEG FPATTFYFET TGPEQQALRL
PSQPGDYEIV FVATTDPWTV LDRTSITLSD PDLSLKAPSQ VAAGQDFAVL WNGIAPNPAD
YIALARAGDD LPHLVSYAHT ESHLTRLTAP EEAGAYELRF FYAEGDRIVT AQPIIVD
|
|---|
| |