| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3214 |
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| Symbol | |
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| ID | 4075318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 209629 |
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| End bp | 210435 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638004723 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_611450 |
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| Protein GI | 99078192 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.620459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAG ATCGTTTGCT AAACACGCTT GGAGCCTGGC TTCTGGCCTT GGTCTGGATC
TTGCCGCTTG CCTATGCGGT TTGGACTGCA ATCCATCCGG CGGCTTATGA AGCACGCTTT
GATCTCTTTG CGCCCCTCTC GTTGGAAAAT TTCGCCAAAG CCTGGAATGC TGCTCCCTTT
GGGCGCTATT TTCTCAACAC CTTCGTGTTG GTGACGGTCA TCCTATTTGG GCAGATCGTT
CTGTGTACCT TGGCCGCCTA TGCCTTTGCC CGCTATCAGT TTCCGGGCCG CAATGTCTTG
TTTGCGCTTG TGCTGATGCA GCTTCTGATC ATGCCCGATA TTCTCATCGT GGAGAATTAC
AAGGCGATCC GGTTTCTCGA TCTTGTCGAT ACGATCCCCG CGATTGCCCT GCCATACATC
GCCTCGGGAT TTGGTATTTT CCTTCTTCGC CAGACTTTTA TGTCTGTCCC AAAAGAGCTG
GAAGAAGCGG CGCAGATCGA GGGGATGTCC ACGCTGGGGA TCCTGATCAA GGTCTATATG
CCCTTGGCGA TCCCGACTTA TCTTGCCTAT GGCCTGGTGT CGGTGAGCCA CCATTGGAAC
AACTTCCTCT GGCCGCTCAT AATTACGAAC TCGGTTGAGA CCCGGCCAGT GACCGTGGGA
TTGAGCATCT TTTCCGCCAT CGACTCCGGT GTGGAATGGA GCGTCATCAA CGCGGCCACG
CTCATGACGT CAGGCCCGCT TCTCCTCGCG TTTTTGCTTT TTCAGCGCCA ATTTGTGCAA
AGCTTCATGC GCGCCGGGAT CAAGTAG
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| Protein sequence | MSADRLLNTL GAWLLALVWI LPLAYAVWTA IHPAAYEARF DLFAPLSLEN FAKAWNAAPF
GRYFLNTFVL VTVILFGQIV LCTLAAYAFA RYQFPGRNVL FALVLMQLLI MPDILIVENY
KAIRFLDLVD TIPAIALPYI ASGFGIFLLR QTFMSVPKEL EEAAQIEGMS TLGILIKVYM
PLAIPTYLAY GLVSVSHHWN NFLWPLIITN SVETRPVTVG LSIFSAIDSG VEWSVINAAT
LMTSGPLLLA FLLFQRQFVQ SFMRAGIK
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