Gene TM1040_3210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3210 
Symbol 
ID4075314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp205699 
End bp206634 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content56% 
IMG OID638004719 
ProductCheB methylesterase 
Protein accessionYP_611446 
Protein GI99078188 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.152298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCTG CTTACCCGGG GTTGCAAGTG TTGTTGGCGA ATAATCTGAT GATGGCCTAC 
AATCAGGCCG AGGCAGGCCA GCCGAGTTTT GCCTTTGTGG AAGATGGCTT TACCAAGCTG
CCAGAGTTCG AGATGATGCT GGCGTTGTTT TCTGCACTCG ACGTACGTTG GGTCTCGGTC
ATGGATGACC AAAACTCGAC ACCTGCACGC CGCTCTTCGC CGCTGTTGAA TGTTGGCGCG
GGTATCTTCG AACTGACAAA ATCCGACAGC CCGCGCCAGT TCATCCAGTA CTTTGACATG
ATGATCAAAG CACCGCGCCG CAACGCTCCA AGAGCAGCAG CAAACAAGCC TCCGGTCGGC
AGAGATGACT TCAAGAAGGT CATCCTGATT GGATCCTCCA CTGGCGGGGT TGAGGCGCTG
CGGAATGTTC TGGTGGGGTT CCCGATAAAC TGCCCACCGA CCTTGATTGT CCAGCACACA
GGGAAAAGCT TTGGCACCGG TCTGGTGTCG CTTCTGGATC GGATCTGTCC GGCCAAGGTG
GTGGCGGCGG ACGACAATAT CACTTTGCAG AGTGGACACG TCTACATTGC GGCTGGCCAA
CCTCGACACA TGGGCGTCAC GCCGCGCAAA CCTTTCAAAA TTCGAATGAA AGAAGGGCCA
AACATTTCGG GTCACACCCC ATCGGTTGAC GCGTTGTTTT CGTCCGCCGT GCCATTTGCG
CGAGATGTTG TTGCCGCAAT ATTAACTGGT ATGGGGCAAG ATGGGGCCAA GGGCATGTTG
GACCTGCGCA AAGCGGGGGC CACAACCTTC GCCCAAGACG AGAAAACCGC CGTGGTCTAC
GGAATGCCGC GGGTTGCCTG GGAAATTGGC GCTGCTCAAA AACAAGTTCC CCTGGCCAGG
ATGGCCAACG CAATTCTGCA AGCATCCAAG ACTTAA
 
Protein sequence
MEAAYPGLQV LLANNLMMAY NQAEAGQPSF AFVEDGFTKL PEFEMMLALF SALDVRWVSV 
MDDQNSTPAR RSSPLLNVGA GIFELTKSDS PRQFIQYFDM MIKAPRRNAP RAAANKPPVG
RDDFKKVILI GSSTGGVEAL RNVLVGFPIN CPPTLIVQHT GKSFGTGLVS LLDRICPAKV
VAADDNITLQ SGHVYIAAGQ PRHMGVTPRK PFKIRMKEGP NISGHTPSVD ALFSSAVPFA
RDVVAAILTG MGQDGAKGML DLRKAGATTF AQDEKTAVVY GMPRVAWEIG AAQKQVPLAR
MANAILQASK T