5 homologs were found in PanDaTox collection
for query gene TM1040_3208 on replicon NC_008043
Organism: Ruegeria sp. TM1040



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008043  TM1040_3208  hypothetical protein  100 
 
 
100 aa  207  5e-53  Ruegeria sp. TM1040  Bacteria  normal  0.0772481  normal 
 
 
-
 
NC_009484  Acry_2706  hypothetical protein  30.67 
 
 
100 aa  46.6  0.0001  Acidiphilium cryptum JF-5  Bacteria  normal  0.851372  n/a   
 
 
-
 
NC_010581  Bind_3621  hypothetical protein  31.11 
 
 
116 aa  43.1  0.001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0123877 
 
 
-
 
NC_010338  Caul_0277  CheX protein  31.33 
 
 
95 aa  41.2  0.004  Caulobacter sp. K31  Bacteria  normal  0.255242  normal  0.954082 
 
 
-
 
NC_011989  Avi_4080  hypothetical protein  30 
 
 
110 aa  41.2  0.005  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
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