| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3201 |
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| Symbol | |
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| ID | 4075305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 196546 |
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| End bp | 197571 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638004710 |
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| Product | proline racemase |
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| Protein accession | YP_611437 |
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| Protein GI | 99078179 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3938] Proline racemase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0659896 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.833754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGTT CCAAAACCAT TCATGTCATC TCCGCTCATG CAGAAGGTGA AGTCGGGGAT
GTCATTGTTG GTGGCGTGCT GCCACCTCCG GGTGAAACGC TGTGGGAACA GCGCAATTTC
ATCGCCAATG ACGAAACCTT GCGCAATTTT GTCCTGAATG AGCCACGCGG CGGCGTGTTT
CGCCATGTGA ATCTTTTGGT TCCCCCCAAA CACCCAGAAG CCGTGGCGGC CTGGATCATT
ATGGAACCTG AAGATACGCC ACCGATGTCG GGTTCAAATT CCATATGCGT TTCAACGGTT
TTGCTCGACG GTGGGCTTGT GCCCATGCAG GAACCGGAAA CCCATATGGT TCTGGAAGCC
CCCGGCGGCC TCGTCAGAGT CCGGGCCGAG TGTCACGATG GCAAGGCAAG GCGCATTTTC
GTGCAGAACC TACCGAGTTT TGCCGACAAG ATCCAAGTGC CGCTCGACGT CAAAGGGCTT
GGGACCATTA CCGTCGACAC AGCCTACGGA GGCGACAGTT TTGTGATCGT TGATGCCGAG
GCTCTCGGAT TCGAGATCAC AGAGGTCGAA GCCAAGGACA TCGCCAATCT CGGTGTGCGT
ATCACTGACG CAGCCAACGA ACAGCTTGGG TTCTGCCACC CCGAAAATCC GGAATGGGAT
CACATTTCCT TCTGCGCGTT CTGCGGCCCG CTTCGTGAAA CTGAAACAGG TTTCACCAGC
AAATCTGCCG TCGCCATTCA ACCTGGCAAA GTCGATCGCT CCCCTACCGG CACGGCAGTG
TCAGCACGAA TGGCGTTGAT GTCTGCGCGC GGTCAGATGA CGGCGGGCCA GAGCTTTGAA
GCGGTTTCTA TCATCGGGTC GAGTTTTACG GGCCAGATCT TGGACGTCAC GCAGGTTGGC
ACGAAGCCGG CGATCATTCC AGAAATCAGC GGCCGCGGTT GGGTTACCGG CATACACCAA
CATATGCTCG ACCCCGAAGA TCCCTGGCCC GAAGGCTACC GGCTGTCTGA CACCTGGGGA
GCCTGA
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| Protein sequence | MRSSKTIHVI SAHAEGEVGD VIVGGVLPPP GETLWEQRNF IANDETLRNF VLNEPRGGVF
RHVNLLVPPK HPEAVAAWII MEPEDTPPMS GSNSICVSTV LLDGGLVPMQ EPETHMVLEA
PGGLVRVRAE CHDGKARRIF VQNLPSFADK IQVPLDVKGL GTITVDTAYG GDSFVIVDAE
ALGFEITEVE AKDIANLGVR ITDAANEQLG FCHPENPEWD HISFCAFCGP LRETETGFTS
KSAVAIQPGK VDRSPTGTAV SARMALMSAR GQMTAGQSFE AVSIIGSSFT GQILDVTQVG
TKPAIIPEIS GRGWVTGIHQ HMLDPEDPWP EGYRLSDTWG A
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