Gene TM1040_3170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3170 
Symbol 
ID4075340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp150625 
End bp150957 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content58% 
IMG OID638004673 
Producthypothetical protein 
Protein accessionYP_611406 
Protein GI99078148 
COG category[S] Function unknown 
COG ID[COG3492] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGC CAGACCTCGA CGCCCAGACC CAGATCGAAC TGGAAGCGGC CGCCTTTCGC 
CGCCTGCGTC AACACCTGAT GCAGGACCGC ACGGATGTGC AGAACATCGA CATGATGAAT
CTCACCGGGT TCTGCCGCAA CTGCCTCAGC CGCTGGTACC AGGAAGCGGC CAATGAGAAG
GGCATCGAGA TGGACAAAGG ACAAGCGCGC GAGATTTTCT ATGGCATGAC CATGGACGAC
TGGAAGGCCA ACTACCAAAC CGAGGCGGGC GCCGATAAAC AAGAGGCCTT CCAAAAGGCC
TTTGCCGAGA ATGTCGGCAC CGAGAAGGGT TGA
 
Protein sequence
MTQPDLDAQT QIELEAAAFR RLRQHLMQDR TDVQNIDMMN LTGFCRNCLS RWYQEAANEK 
GIEMDKGQAR EIFYGMTMDD WKANYQTEAG ADKQEAFQKA FAENVGTEKG