Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3170 |
Symbol | |
ID | 4075340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | - |
Start bp | 150625 |
End bp | 150957 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638004673 |
Product | hypothetical protein |
Protein accession | YP_611406 |
Protein GI | 99078148 |
COG category | [S] Function unknown |
COG ID | [COG3492] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAGC CAGACCTCGA CGCCCAGACC CAGATCGAAC TGGAAGCGGC CGCCTTTCGC CGCCTGCGTC AACACCTGAT GCAGGACCGC ACGGATGTGC AGAACATCGA CATGATGAAT CTCACCGGGT TCTGCCGCAA CTGCCTCAGC CGCTGGTACC AGGAAGCGGC CAATGAGAAG GGCATCGAGA TGGACAAAGG ACAAGCGCGC GAGATTTTCT ATGGCATGAC CATGGACGAC TGGAAGGCCA ACTACCAAAC CGAGGCGGGC GCCGATAAAC AAGAGGCCTT CCAAAAGGCC TTTGCCGAGA ATGTCGGCAC CGAGAAGGGT TGA
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Protein sequence | MTQPDLDAQT QIELEAAAFR RLRQHLMQDR TDVQNIDMMN LTGFCRNCLS RWYQEAANEK GIEMDKGQAR EIFYGMTMDD WKANYQTEAG ADKQEAFQKA FAENVGTEKG
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