| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3166 |
|---|
| Symbol | |
|---|
| ID | 4075336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008043 |
|---|
| Strand | + |
|---|
| Start bp | 146638 |
|---|
| End bp | 147639 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638004669 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_611402 |
|---|
| Protein GI | 99078144 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3367] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAGA CCCCTTATCT CCTGTTCCTC GGCGACGCGC CCGACATGCT GGCCGCCAAA
GTGGCCATCG GCATCCGCGA CTGGCGCCCC GACCATGCGG TGGGCCAGAT CAGCCTGCCA
GGATGTGGCG CGGATCTTGG CCTCACCGAG ATGACGCTTG AAGACGCCAA GGCCGCTGGC
GCCAAAACGC TGGTGATCGG TGTCGCCAAC CGAGGCGGCA AGATCAGTCA GGAGTGGAAG
AAAGTTCTGG TGCAGGCGCT GGAAGAGGGG TTCGACCTTG CCTCCGGCTT GCACAACCTC
TTGCGTGATG AACCTGATCT GGCCGCCGTG GCAGAGGCCA CCGGGCGTAC CCTACATGAT
GTGCGGGTGC CTTCTGTGCA ATATCCGATC GCCGATGGCG TCAAGCGTCG CGGCAAGCGC
TGCCTCGCGG TGGGCACCGA TTGTTCGGTC GGCAAGATGT ACACGGCGCT TGCCATGGAC
AAGGAAATGC AGGCCCGCGG TATGAAATCG ACCTTCCGCG CCACGGGTCA GACCGGCATT
CTGATCACCG GCGACGGCGT GCCGCTGGAC GCGGTGATCG CTGACTTTAT GGCGGGCTCA
ATCGAGTATC TGACGCCCGA CAATGATGAC GATCACTGGG ATCTCATCGA GGGTCAGGGC
TCGCTGTTCC ACGTGTCTTA CTCCGGTGTG ACCATGGCGC TGGTGCATGG CGGCCAGCCC
GACGCGTTGA TCCTCTGTCA CGAGCCCACC CGCACCCACA TGCGCGGTCT GCCCGATTAT
GATGTGCCCA CGCTTGAGGA ACTGCGCGAT GTGGCCCTGC CGCTGGCGCA ACGGGCCAAC
AAGAACTGCA AGATCGTCGG AATTTCCGTC AACACCCAGC ATTTGGGTGA GGAGGAGGCC
GTGGCCTACC TGAAGGAAGT CGAGGGCCGG ATGGGTCTGC CTGCGGTGGA CCCCTATCGC
CACGGCGCCG GTCGTCTGGT GGACGCGCTG GCCGCGGTCT GA
|
|---|
| Protein sequence | MIETPYLLFL GDAPDMLAAK VAIGIRDWRP DHAVGQISLP GCGADLGLTE MTLEDAKAAG
AKTLVIGVAN RGGKISQEWK KVLVQALEEG FDLASGLHNL LRDEPDLAAV AEATGRTLHD
VRVPSVQYPI ADGVKRRGKR CLAVGTDCSV GKMYTALAMD KEMQARGMKS TFRATGQTGI
LITGDGVPLD AVIADFMAGS IEYLTPDNDD DHWDLIEGQG SLFHVSYSGV TMALVHGGQP
DALILCHEPT RTHMRGLPDY DVPTLEELRD VALPLAQRAN KNCKIVGISV NTQHLGEEEA
VAYLKEVEGR MGLPAVDPYR HGAGRLVDAL AAV
|
|---|
| |