| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3114 |
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| Symbol | |
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| ID | 4075561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 85541 |
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| End bp | 86449 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638004616 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_611350 |
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| Protein GI | 99078092 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.171582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAA CAGCGAACGC CGTGGCTGCA ATGGCCGACG ATATCATCGA CCTGACGCCG
AAAGAGCGGA TGATCCGCAA GGCAAAAAGC CACTTCGGCT TCAAGTTCGG CGCATTTATC
GTGATCTCAT TCTCATTGAT CGCGATCTTC GCTCCGCTTT TTGCACCGCA TGATCCCTAT
CTTCAGGACC TTGCCAAACG TCTGGTGCCG CCCGTCTGGC AAGAGAGCGG GTCGTGGGAG
CATATCCTGG GCACCGACGC GCTCGGCCGC GATTACCTGA GCCGCTTGAT TTACGGTGCA
CGCATTTCCA TGGGCGTAGG CTTTGGCGCT GCAACACTGG GATGTCTGAT TGGCGTCACC
ATCGGTCTCA GTGCGGGCTA TCTGGGCGGG CGCGTCGATC AGGCTGCCTC CTTTCTGCTG
ACCTGCCAAC TGGCGCTACC GTCTCTCTTG CTGGCCATGG CGCTTGTGTT CTTTGTTGGC
TCTTCGGTCA CGACTCTGTT GATCGTGCTC GGTGTGTTGC ATTGGCAATA CTACATGGTG
GTCACGCGGA CGCTGACCCG GCAGATCAGA TCGCTGGAGT ATGTCGCGGC GGCGCGCTCG
ATCGGCAGCA CCGACCGGCA GATCCTGTTC TACGAAATCC TGCCGAACCT CTTTAACCAG
ATCATCGTTG TGTTCTCGTT GGAAATGGCC GTCGTCATCA TCCACGAAGC GTCGCTGTCG
TTCCTCGGTG TGGGGGTGCA GCCCCCGACC GCCTCCTGGG GGCTGATGAT CGCTGAGGGC
AAGACCATGA TGTATTTCAA ACCCTACCTC GTCGTGATCC CCGGTGCCGC GCTGTTCTTG
TTGGTGCTGG CTGTGAATCT GCTGGGCGAT GGCATTCGCG ACATCACCGC ACCTGAAAGC
CGCAACTGA
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| Protein sequence | MTTTANAVAA MADDIIDLTP KERMIRKAKS HFGFKFGAFI VISFSLIAIF APLFAPHDPY
LQDLAKRLVP PVWQESGSWE HILGTDALGR DYLSRLIYGA RISMGVGFGA ATLGCLIGVT
IGLSAGYLGG RVDQAASFLL TCQLALPSLL LAMALVFFVG SSVTTLLIVL GVLHWQYYMV
VTRTLTRQIR SLEYVAAARS IGSTDRQILF YEILPNLFNQ IIVVFSLEMA VVIIHEASLS
FLGVGVQPPT ASWGLMIAEG KTMMYFKPYL VVIPGAALFL LVLAVNLLGD GIRDITAPES
RN
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