Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3043 |
Symbol | |
ID | 4075137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 12814 |
End bp | 13383 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638004544 |
Product | hypothetical protein |
Protein accession | YP_611279 |
Protein GI | 99078021 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCG ACCTGAACCA ATCCGATTGC CTTGTTCTGC AAGGGACAAC TCGCGTCATT TCCAGTGTTC TGGGGCTTGC CTTGCTGGTC GCGCTTGGGC TCGCCCTGAC TGCTGCCATC TCGGGCGCCA TCGCGGGATG GGCGATAGCC CTCGCAGTTG TGGTCGTTGG GGGCGGGATC TTGTGGCTGG TCTATCACCA AACCGAAGTG GTTTTCGACC GCACACATAA TACCCTGACC CTGCGCAAAA CCATGCTGCA TGGCACCCGT GTCGACACCA TTCCCCTGGA CACCGTGTTG CAAGCGGATG TCGACCTGAG GCGCAATGAA CGCAGCAACA ACAGGCTGCA TGCCAGCTAC ACCTATCGGC TCTGTGTTAT CACCCGCGCG GCAACGCACC GGCATCGCGT ACCGCTGTCG CATGGCTACA CCACGAGCAA ACGCTCGTTG CTAACGGCGC AGGAAATCAA TGACTGGCTG GGCGTACCCA ATGCACCGAT CGCCCGGGGG CTGAGCATGG CGGACATCGC TGAAGTGATG CAAACACTCG GGCTTCGAAA ATCGGCCTAA
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Protein sequence | MKIDLNQSDC LVLQGTTRVI SSVLGLALLV ALGLALTAAI SGAIAGWAIA LAVVVVGGGI LWLVYHQTEV VFDRTHNTLT LRKTMLHGTR VDTIPLDTVL QADVDLRRNE RSNNRLHASY TYRLCVITRA ATHRHRVPLS HGYTTSKRSL LTAQEINDWL GVPNAPIARG LSMADIAEVM QTLGLRKSA
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