Gene TM1040_3043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3043 
Symbol 
ID4075137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp12814 
End bp13383 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content59% 
IMG OID638004544 
Producthypothetical protein 
Protein accessionYP_611279 
Protein GI99078021 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG ACCTGAACCA ATCCGATTGC CTTGTTCTGC AAGGGACAAC TCGCGTCATT 
TCCAGTGTTC TGGGGCTTGC CTTGCTGGTC GCGCTTGGGC TCGCCCTGAC TGCTGCCATC
TCGGGCGCCA TCGCGGGATG GGCGATAGCC CTCGCAGTTG TGGTCGTTGG GGGCGGGATC
TTGTGGCTGG TCTATCACCA AACCGAAGTG GTTTTCGACC GCACACATAA TACCCTGACC
CTGCGCAAAA CCATGCTGCA TGGCACCCGT GTCGACACCA TTCCCCTGGA CACCGTGTTG
CAAGCGGATG TCGACCTGAG GCGCAATGAA CGCAGCAACA ACAGGCTGCA TGCCAGCTAC
ACCTATCGGC TCTGTGTTAT CACCCGCGCG GCAACGCACC GGCATCGCGT ACCGCTGTCG
CATGGCTACA CCACGAGCAA ACGCTCGTTG CTAACGGCGC AGGAAATCAA TGACTGGCTG
GGCGTACCCA ATGCACCGAT CGCCCGGGGG CTGAGCATGG CGGACATCGC TGAAGTGATG
CAAACACTCG GGCTTCGAAA ATCGGCCTAA
 
Protein sequence
MKIDLNQSDC LVLQGTTRVI SSVLGLALLV ALGLALTAAI SGAIAGWAIA LAVVVVGGGI 
LWLVYHQTEV VFDRTHNTLT LRKTMLHGTR VDTIPLDTVL QADVDLRRNE RSNNRLHASY
TYRLCVITRA ATHRHRVPLS HGYTTSKRSL LTAQEINDWL GVPNAPIARG LSMADIAEVM
QTLGLRKSA