| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3010 |
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| Symbol | |
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| ID | 4076583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 3178764 |
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| End bp | 3179393 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638008339 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_615004 |
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| Protein GI | 99082850 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.276593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGGCT TTGCCCCCTA TCGAACGTTT ATGAGCGAAA CCGCAGTTGA CAAGATTTTT
CGCGCGCTGA TGGAGCGGAT CGTGACCGGC GATCTTCCCG CAGGAGAGAA ACTGCGGCAA
GACCACATTG CGCGCGACTA CGACGTCAGC CACGTTCCCG TGCGCGAGGC CTTTTTGCGG
TTGGAAGCCA AGGGACTGGC CAAATCCATA CCACACAAAG GCATGCGCGT TACCGCTCTG
GAGCCAACGG AAATCCGGGA AGTGATCGAG ATGCGTGTGG CGCTGGAAGT TCTAGCGCTC
ACCCACGCCC TACCCCGACA CGACGCCGAC ACATTGGCTC AGGTAGAGGC CGCGCGACAG
GCCTGTGACG CCGCGCAGGA TATGGTGCTT TGGGACCGCT GCAACAGGCA GTTTCACACC
GCCCTGCTGC AGCCCTGCGA GATGCCACGC CTGCTATCGG CGATTGAAGA TCTTCACATC
ACCGCTGCCA GGCACCTTTT CGTGCATTGG CGCGACCGCT GGACGTCGCG CATCGACAGC
GACCACGACG CTCTGCTGGA AGCCGTCACC GCACAGGATC TGCCGCGCGC CTGTGACATT
CTGCGGCGAC ACCTGCGCCG GGTGAGCTGA
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| Protein sequence | MGGFAPYRTF MSETAVDKIF RALMERIVTG DLPAGEKLRQ DHIARDYDVS HVPVREAFLR
LEAKGLAKSI PHKGMRVTAL EPTEIREVIE MRVALEVLAL THALPRHDAD TLAQVEAARQ
ACDAAQDMVL WDRCNRQFHT ALLQPCEMPR LLSAIEDLHI TAARHLFVHW RDRWTSRIDS
DHDALLEAVT AQDLPRACDI LRRHLRRVS
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