Gene TM1040_2975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2975 
Symbol 
ID4078005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp3140173 
End bp3140541 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content56% 
IMG OID638008304 
Producthypothetical protein 
Protein accessionYP_614969 
Protein GI99082815 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.738857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAC TTACTGATCA GACCCCGCAA GCCATTATCG ATGCTCTTGA CGTACTCCTC 
GAAGAGGAAC GCGGTGCATT GACGAATGGG GAACTCGATA AACTTGAAGG TATTCTGGCG
AGAAAAGAAG ACCTCTTCGA CCAGCTCAAC AGCATGACCG ATATCGACCA TGGGGCGCTG
GACTCGGTGC AATCGAAGGT GTCGCGCAAC CAGGCCCTCC TGGGGAGCGC CATGCAGGGC
ATTAAAGCCG TGGCAAACCG TATGGCTGAG CTCCGCAAGG TTCGAAAGGG TCTGGATGTC
TACAATCGTT CGGGTCAGCG GACCAGCTTT GCCACCACGG GCAGCCTCAA ACTAGAGAAG
CGCGCCTAA
 
Protein sequence
MSALTDQTPQ AIIDALDVLL EEERGALTNG ELDKLEGILA RKEDLFDQLN SMTDIDHGAL 
DSVQSKVSRN QALLGSAMQG IKAVANRMAE LRKVRKGLDV YNRSGQRTSF ATTGSLKLEK
RA