| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2944 |
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| Symbol | fliP |
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| ID | 4077095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 3114200 |
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| End bp | 3114946 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638008273 |
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| Product | flagellar biosynthesis protein FliP |
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| Protein accession | YP_614938 |
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| Protein GI | 99082784 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
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| TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.854882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.307606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACGAA AATTTCTCGC TCTGGGCGTG TTGGCAGTCT TTGCGCTGCT GGCACAGCCC
CAGGTAGCGC TGGCGCAAGA ATTGAGCCTT AATCTCGCCG ATGGTCAATC GATCTCGGCC
CGCACCATCC AGCTGATCCT GCTTATCACT GTTCTCAGTG TGGCGCCGGG CTTGCTGGTC
ATGCTTACCT GTTTTCCCTT CCTGATCACG GTTCTGTCGA TCCTGCGTCA GGCGATCGGG
TTGCAGCAAG CCCCGCCGAA CATGCTCATG ATCAGCCTTG CGATGTTCCT GACCTATTTC
GTGATGGAAC CCGTTTTTAC CGAAGCATGG GAGACCGGAA TCGCACCACT GATCGACGAG
GAACTGGAAG TTGTGCCAGC CCTTGAACGC GCTGTCGAAC CTTTCCGAGT CTTCATGGCC
AACCGGTTGG ATCCAGACAC CTACTACGCC ATCGCCGATC TGCGCCCAGG CACAGAGGGA
AGTGACCCTT CACCTGAATC GCCGCTCTCC GTGTTGATCC CGAGCTTTAT GCTTTCCGAG
ATCACACGCG CATTCGAAAT CGGGTTTCTT GTCTTTCTTC CCTTCTTGGT CATCGATCTC
GTGACTGCGG CAATCCTGAT GTCGATGGGG ATGATGATGG TTCCACCGGC ACTGGTTTCC
TTGCCTTTCA AACTGGCATT CTTTGTCGTC GCGGACGGTT GGAGCCTGAT CGCCAGCGCC
CTCGTCAGGA GCTATTACCC CTCATAG
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| Protein sequence | MTRKFLALGV LAVFALLAQP QVALAQELSL NLADGQSISA RTIQLILLIT VLSVAPGLLV
MLTCFPFLIT VLSILRQAIG LQQAPPNMLM ISLAMFLTYF VMEPVFTEAW ETGIAPLIDE
ELEVVPALER AVEPFRVFMA NRLDPDTYYA IADLRPGTEG SDPSPESPLS VLIPSFMLSE
ITRAFEIGFL VFLPFLVIDL VTAAILMSMG MMMVPPALVS LPFKLAFFVV ADGWSLIASA
LVRSYYPS
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