| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2851 |
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| Symbol | hslU |
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| ID | 4076385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3021606 |
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| End bp | 3022916 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638008180 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_614845 |
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| Protein GI | 99082691 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.192992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.735765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGATC TGACCCCCCG CGAAATCGTT TCTGAACTCG ACCGGTTCAT CATTGGCCAA
AAGGATGCCA AACGCGCTGT CGCTGTAGCG TTGCGCAATC GCTGGCGCCG CAAACAGCTA
CCGGATGACC TGCGCGACGA AGTGCATCCA AAGAACATCC TGATGATCGG CCCCACTGGC
GTCGGCAAGA CCGAAATTTC GCGCCGCTTG GCGAAGCTGG CGCGCGCGCC TTTCATCAAG
GTCGAAGCTA CCAAATTCAC CGAGGTTGGC TATGTCGGCC GCGACGTGGA ACAAATCGTG
CGTGATCTTG TGGATACCGC AATCGTGCAA ACCCGCGAGC ACATGCGAGA GGACGTCAAA
GCCAAGGCGC ATAAAGCCGC CGAGGACCGT GTGCTCGAAG CGATCGCCGG AACCGATGCC
CGCGAGAGCA CGCTCGAGAT GTTCCGCAAA AAGCTCAAGG CAGGTGAGCT TGATGACACG
GTGATCGAGT TGGACATCGC CGATACCTCC AACCCCATGG GCGGTATGTT TGAAATTCCG
GGTCAGCCAG GTGCAAACAT GGGGATGATG AACCTCGGTG ATCTCTTCGG AAAAGCCATG
GGCGGGCGTA CCACACGCAA AAAGCTCACC GTTGCAGAGA GCTATGACGT GTTGATCGGG
GAAGAAGCGG ACAAGCTTCT GGATGATGAA ACCGTAAACA AGGCTGCATT GGAAGCAGTA
GAGCAGAACG GGATCGTGTT CCTTGATGAG ATCGACAAGG TCTGCGCCCG TTCCGATGCG
CGTGGTGGCG ACGTCAGCCG TGAGGGCGTG CAGCGGGACT TGCTGCCGCT GATCGAAGGC
ACCACTGTCA GCACCAAACA TGGCCCAGTC AAAACCGACC ATATCCTGTT CATAGCGTCC
GGTGCGTTCC ACATCGCCAA GCCTTCTGAT CTCCTGCCCG AGCTGCAAGG ACGTTTGCCG
ATCCGCGTAA ACCTGCGCGC CCTCAGTGAA GAGGATTTTG TGCGCATCCT GACCGAAACC
GACAATGCGC TGACACGCCA GTACGAGGCG CTCTTGGGCA CAGAAAAAGT CAAAGTGACC
TTCACCAAGG ACGGGATCCA CGCCCTTGCG CAGATTGCCG CCGAAGTGAA CCACACGGTG
GAGAACATCG GCGCGCGGCG TCTCTACACG GTAATGGAGC GGGTCTTTGA GGAGATGTCC
TTTGCTGCGC CGGATCGATC CGGTGAAGAG ATCATCGTAG ATGAGCCCTT TGTGACCAAG
AATTTGGGCG AATTGACCAA ATCCACCGAT CTCAGCCGCT ACGTGCTCTG A
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| Protein sequence | MTDLTPREIV SELDRFIIGQ KDAKRAVAVA LRNRWRRKQL PDDLRDEVHP KNILMIGPTG
VGKTEISRRL AKLARAPFIK VEATKFTEVG YVGRDVEQIV RDLVDTAIVQ TREHMREDVK
AKAHKAAEDR VLEAIAGTDA RESTLEMFRK KLKAGELDDT VIELDIADTS NPMGGMFEIP
GQPGANMGMM NLGDLFGKAM GGRTTRKKLT VAESYDVLIG EEADKLLDDE TVNKAALEAV
EQNGIVFLDE IDKVCARSDA RGGDVSREGV QRDLLPLIEG TTVSTKHGPV KTDHILFIAS
GAFHIAKPSD LLPELQGRLP IRVNLRALSE EDFVRILTET DNALTRQYEA LLGTEKVKVT
FTKDGIHALA QIAAEVNHTV ENIGARRLYT VMERVFEEMS FAAPDRSGEE IIVDEPFVTK
NLGELTKSTD LSRYVL
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