| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2820 |
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| Symbol | |
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| ID | 4076639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2984942 |
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| End bp | 2985931 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638008148 |
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| Product | 3-beta hydroxysteroid dehydrogenase/isomerase |
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| Protein accession | YP_614814 |
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| Protein GI | 99082660 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0203208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.613644 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAAC TGGTCACCAT TTATGGCGGT TCAGGGTTTG TCGGTCGCTA TATCGCGCGC
CGCATGGCAA AAGAAGGCTG GCGCGTGCGC GTGGCCGTTC GTCGCCCGAA TGAGGCAATG
CACGTCAAAC CCTATGGTGT GCCGGGGCAG GTTGAGCCGG TTTTCTGCAA CATCCGCGAT
GACGCTTCTG TCGCTGCTGT TATGGCAGGC GCAGATGCGG TGGTAAATTG CGTGGGTGTT
CTGAACGAAG TCGGCAAAAA CACGTTCTCT GCGGTGCAGT CCGAAGGGGC TGGTCGCATC
GCGCGGATCG CGGCTGATAC AGGTGTTGAA CGTCTTGTTC ATGTTTCTGC GATTGGTGCA
GATGCTGATG GCGACAGCGC GTATGCCCGC ACCAAGGCCG AAGGGGAAGC TGCGGTGCTT
GAAGCTTTTC CCTCTGCAAT GATCCTGCGT CCCTCGATCA TCTTTGGCCC CGAAGACCAG
TTCTTTAATC GCTTTGCGAG CATGACGCGC TTTGGCCCCG TTCTGCCCAT CGCAGGAGGG
ACGACACGGT TTCAGCCGGT CTATGTCGAT GACGTCGCGA AAGCTGCTGT TGCGGGTCTG
ACTGGGCAGG CTGCTGCAGG AACCTATGAG CTTGGTGGCC CCGAGGTCAA AAGCTTTACA
GAGTTGATGT CGCAAATGCT TGATGTGATC CATCGCCGCC GTCTCGTTGT GTCGCTACCG
AATTTTGTCG CCCGCCTCAT GGCTTTTGGG TTCGATATGG CGCAGGCGGT GACCTTTGGC
CTGTTTACAA ACGGCCTGCT GACGCGCGAC CAACTAAAGA ACCTGCAAAA CGACAATGTG
GTCAGTGAAG GCGCCAAAGG TCTGGCAGAC CTCGGGATCG AACCGGTTAC CATGGGGTCC
GTTCTACCCG ACTATCTGTG GAAGTTCCGC CCATCCGGTC AGTACGACGA ATTGATGAAA
TCGGCCGGTA ACCTGCGCGG AGACATCTGA
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| Protein sequence | MSKLVTIYGG SGFVGRYIAR RMAKEGWRVR VAVRRPNEAM HVKPYGVPGQ VEPVFCNIRD
DASVAAVMAG ADAVVNCVGV LNEVGKNTFS AVQSEGAGRI ARIAADTGVE RLVHVSAIGA
DADGDSAYAR TKAEGEAAVL EAFPSAMILR PSIIFGPEDQ FFNRFASMTR FGPVLPIAGG
TTRFQPVYVD DVAKAAVAGL TGQAAAGTYE LGGPEVKSFT ELMSQMLDVI HRRRLVVSLP
NFVARLMAFG FDMAQAVTFG LFTNGLLTRD QLKNLQNDNV VSEGAKGLAD LGIEPVTMGS
VLPDYLWKFR PSGQYDELMK SAGNLRGDI
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