| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2812 |
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| Symbol | |
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| ID | 4076631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2975706 |
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| End bp | 2976497 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638008138 |
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| Product | cytochrome c1 |
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| Protein accession | YP_614806 |
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| Protein GI | 99082652 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2857] Cytochrome c1 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.241158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.375315 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAGA AAATTGTAAC CGGTGCTGCC TTTGCTCTGG CACTTGTTCC GGCCGCGTCT
TTCGCGGCTG GGGCAGGCGG CCATGTCGAA GACTACGCCT TCTCTTTTGA GGGGCCGTTT
GGCACCTACG ACCAGAACCA GCTTCAGCGT GGCCTTCAGA TCTACACCGA GGTCTGCGCG
GCATGTCACG GTCTGAAGCA AGTACCGATC CGCACTCTCT CTGACTCTGA TGGCCCGGGC
ATGCCCGAAG ATCAGGTCCG GGCTTACGCG GCGGACAACT TCGAGGTGTT CGACCCCGAG
CTTGATGATT TCCGCCCGGC CAAACCGGTG GATCATTTCC CCGAGAACAC GGCCCTTGGC
GCACCGGATC TGAGCCTGAT GGCAAAGGCG CGTGCGGGTT TCCACGGTCC CTATGGCCTT
GGCATCAACC AGCTCTTCAA GGGCATGGGC GGCGCGGAAT ACATCGCCTC CCTGATGACC
GGCTACACCG GCGAAACCAA GGTGGAAGCC GGGACCACGT TCTACAAGAA CACCGCCTTC
CCCGGTGGCT GGATCTCGAT GGCACCGCCG CTCGCGGATG AGCAGGTGGA GTTCATCGAC
GGTCATGAAA ACGACCTCGA GAACCTCTCG AAGGATGTTT CGGCGTTTCT GATGTGGACT
GCAGAGCCCA AGATGATGGC GCGCAAGCAA GCCGGTTTTG TTGGTGTGCT GTTCCTGACC
GTGCTGTCGG TTCTGCTTTA CCTCACCAAC AAACGCCTCT GGGCCCCGCA CAAAGGCAAG
AAAACCTCCT AA
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| Protein sequence | MFKKIVTGAA FALALVPAAS FAAGAGGHVE DYAFSFEGPF GTYDQNQLQR GLQIYTEVCA
ACHGLKQVPI RTLSDSDGPG MPEDQVRAYA ADNFEVFDPE LDDFRPAKPV DHFPENTALG
APDLSLMAKA RAGFHGPYGL GINQLFKGMG GAEYIASLMT GYTGETKVEA GTTFYKNTAF
PGGWISMAPP LADEQVEFID GHENDLENLS KDVSAFLMWT AEPKMMARKQ AGFVGVLFLT
VLSVLLYLTN KRLWAPHKGK KTS
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