Gene TM1040_2811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2811 
Symbol 
ID4076579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2975043 
End bp2975564 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content63% 
IMG OID638008137 
Producthypothetical protein 
Protein accessionYP_614805 
Protein GI99082651 
COG category[V] Defense mechanisms 
COG ID[COG3896] Chloramphenicol 3-O-phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.248664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.24254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGA TACTGTTTCT GCATGGCCCC TCCAGCAGCG GCAAATCCAC ACTCGCCAAA 
GCGATCAGAG AGGCTTCCTC CCGACCGCTC CTGCATCTCT CCATCGATCA TCTGCGCGAC
AGCGGAGCCT GGGAGCCGCA GGCCTACCCG GATTGGGCAG GAGCGCGCGC TGGATTCTTC
TCCGGCTTTC ACAGGGCGGT CAAAGCCTTT GCGGATGCCG GGAACGACCT GATCCTTGAG
CATATCCTCG ACACGCCGGG CTGGCATGCT GATCTCCAGC AGCTCTTTTG CGGCCACAAG
GTCATTTTCA TCGGCCTCAC GCCCTCGCTA TCCACGCTCG AGACCCGCGA GGCCGCGCGC
GGCGACCGCC CGGCGGGCAG CGCAGCGCGG GATTTTGAAC ATGTTCACCG CGACCTCAGC
TATGATCTGA CGCTGGATGG CTCCGCCCCC CTCCAGGAGA GTGTCAGATC CATCCTGTCG
ATGACCTCTG CACCACTAGC CCGCTCCCGG TTCTTCAACT GA
 
Protein sequence
MALILFLHGP SSSGKSTLAK AIREASSRPL LHLSIDHLRD SGAWEPQAYP DWAGARAGFF 
SGFHRAVKAF ADAGNDLILE HILDTPGWHA DLQQLFCGHK VIFIGLTPSL STLETREAAR
GDRPAGSAAR DFEHVHRDLS YDLTLDGSAP LQESVRSILS MTSAPLARSR FFN