| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2769 |
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| Symbol | |
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| ID | 4077641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2917169 |
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| End bp | 2919958 |
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| Gene Length | 2790 bp |
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| Protein Length | 929 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638008094 |
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| Product | double-transmembrane region-like |
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| Protein accession | YP_614763 |
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| Protein GI | 99082609 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02226] N-terminal double-transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.676495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATGA TCGCGGGCAT AGGTTTTGCA AGCCCCTGGC TTCTGCTTGG GCTCTTGGTG
TTGCCGATCC TGTGGCTTTT GCTGCGTGCA ATCCCGCCCG CGCCCAAACG GCAGCCCTTT
CCTGCCGTGA CGCTTTTGCT CGGGCTCAAG GATGACGAGA GCCTTTCGGA TCGCACGCCT
TGGTGGCTTT TGCTGTTGAG GATGCTGGCC GTCGCGGCAG CCATCGTGGG GCTCTCCGGG
CCGGTGCTGA ACCCCGCACA AGAACAGAGC GGCGATGGGC CGTTGCTGAT CGTGATGGAT
TCCGGCTGGG GCGGCGCGCC TCATTGGGAG CAAAACCGCA GCCACATTGA GGCAGAACTC
AGTGAGGCAG GCCGGGCCGG ACGCCCGGTT GCCCTGTTGC GCCTGACCGA GCCTGAGCCA
CTGCAATTTC GCGCCGCAGG ATATTGGGGA CGCCAACTCC CGGGCATGAC GCCAGCACCC
TGGGTTGCGT CCCCTGAACA GGTGCGTGCC GCGATGGACC TCATTGCAGA GGTCGAGGGC
GGATTTGACA CGCTCTGGCT CAGTGACGGG CTGGCAATGG CGGCGCGCCA GGATCTGGTC
ACGGCCCTTG GTGAGCGCGG CAACATCGAA GTCTATGAAA GCGGCGCTCC CGTGATCGGG
CTTCTGCCCG CGACCTATGC CGATGGAGCG ATCACACTCA GTGCCCAGCG CAGTAATACC
GGGCTGACGC AGGAAATCAC GGTGCAGGCC TTGGGTCCGG ATCCCAATGG CACCGAAAGG
GCGCTGGCCT CCACCACGAT CACCTTTGAC GCAGCGGCCA GCGCTGCAGA GACTCAGATC
GCGCTGCCGA TGGAGCTGCG CGCCCGCATC AGTCGCTTTG AAATCCTCAA TACGCGTTCC
GCCGGGGCGG TTTCGCTCAC CGATGATCGC TTGCGGCGGC GGGAAGTGGC ACTCATTTCC
GCCCAGAGCG AGGATGAGGG CCTCGCGCTC TTGTCAGCGC TGCACTACCT GCGCCAAGCG
CTGGAACCGA CGGCGGAGCT GCTGGAAGGC TCGTTGACGG ATCTGCTACC CGCAAACCCG
GATGTCGTGG TTCTGGCGGA TGTGGCCCGC CTTGCTCCCG CCCAGGAAGA AGCCCTGATC
GACTGGGTCG AGTCGGGTGG GCTTTTGTTG CGGTTCGCCG GACCACGGCT TGCTGCCAGC
GACACCGCAC GCGACACTGA GGAACCCTTG ATGCCCGTGC GCCTGCGCAT CGGCGGGCGC
AGCATCGGCG GCGCGATGAG CTGGGGTGAG CCCAAGGCGC TTGCGCCCTT TGCAGAAGGC
TCGCCCTTTT ACGGGTTGGA CATTCCTCAG GATGTCGCAG TGAGCTCTCA GGTCATGGCA
CAGCCCGACC CGGAGCTGGC CAGCCGCGTG GTGGCGGAAC TCAGCGATGG CACCCCGCTG
GTGACCCGCA AACCGCTTGG TCAGGGGCAG GTGATCCTGT TTCATGTCAC TGCAAATGCA
GAATGGAGCA GCCTGCCGCT TTCGGGGCTG TTCGTAGACA TGCTTGAGCG CCTTGCAGTT
TCTTCCGCTT CCAAACCGCC CAGCGCTGAC GATCTGGAAG GCACCACGTG GCAAGCCGTC
GAAGTGCTGG ATGGCTTTGG CCGGTTGACG GACGCGGACA CGCTTTCAGG AGTCGCAGGT
CCAGACCTCA TCGACGCGCC CTCGGGTCCA ACATTGCAAC CCGGGCTCTA TACCAGCGGC
AGCGGAGCCT ATGCGCGCAA TGTACTGCGC GATGGTGATG GTATTGAACC TTCGATCTGG
CCTGCCTCGG TTCCAGTCCT TACCTACGAA GGCGCGGCTG AACGGCCCCT TGGGGGGCTG
CTCCTCAGCC TGGCATTGGT GTTGCTTGCG GTGGATATTG CGGCGGCTCT GTGGGTCTCA
GGCCTTTGGT CTCCGGCCAA AGTAGCTACA ATTGCACTCG GGATGGGCCT CGCGGGTAGC
GGCTTTATTG CTCTGCCGCC CGCAGCACAG GCGCAGATGG CCACCCCACT CAACCTCCCC
TCTGAAACCG AGCTCACCTC TGAGCTGACT CTGGGCCATG TTCTGACCGG CGATGCGCGA
GTCGACCAGA TCGCCGCAGA GGGGCTGCGC GGCCTCAGCA ATGTCATGAC GCTCAGAACA
TCTGTCGAAC CCGCGGCACC CTATGGGGTG GACCTGGAAA CTGATGAGCT CGCGTTCTTT
CCCTTTCTGT ATTGGCCCGT CACCGAGGGC CAGCCGCTGC CCTCATCAGA GGCCTACAGC
AAGCTCAACG CTTATCTGCG CACTGGTGGG ATGATCCTGT TTGACACCCG CGACGCGGAT
CTGACGCAGA CAGGGGCCAG CTCGGGCGCG GCACGGCGCT TGCAACAACT GGCGCTGCCG
CTGGATATCC CGCCACTGGA GCCGATCCCC GCCGACCACG TTCTGACTCG CGCTTTCTAC
CTGCTTCAGG ATTTTCCCGG TCGTCACCCA CGCGGACAGA TCTGGGTCGA AGCCGCACCG
CCGGATGCCA AGCAGGTCGA CGGCCTCCCG TTTCGCAATC TAAACGACGG GGTGACACCC
GTGGTGATCG GAGGCAATGA CTGGGCGGCC GCATGGGCCG TGGATGAACG CAATTCGCCG
CTTTATCCAG TGGGGCGTGG TTTTTCAGGG GAACGCCAGC GCGAACTGGC CCGCCGTTTT
GGGGTCAACC TGCTGATGCA TGTGCTGACG GGGAACTATA AATCCGATCA GGTCCATGTG
CCTGCGCTTC TGGACCGACT GGGGCAGTAA
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| Protein sequence | MTMIAGIGFA SPWLLLGLLV LPILWLLLRA IPPAPKRQPF PAVTLLLGLK DDESLSDRTP
WWLLLLRMLA VAAAIVGLSG PVLNPAQEQS GDGPLLIVMD SGWGGAPHWE QNRSHIEAEL
SEAGRAGRPV ALLRLTEPEP LQFRAAGYWG RQLPGMTPAP WVASPEQVRA AMDLIAEVEG
GFDTLWLSDG LAMAARQDLV TALGERGNIE VYESGAPVIG LLPATYADGA ITLSAQRSNT
GLTQEITVQA LGPDPNGTER ALASTTITFD AAASAAETQI ALPMELRARI SRFEILNTRS
AGAVSLTDDR LRRREVALIS AQSEDEGLAL LSALHYLRQA LEPTAELLEG SLTDLLPANP
DVVVLADVAR LAPAQEEALI DWVESGGLLL RFAGPRLAAS DTARDTEEPL MPVRLRIGGR
SIGGAMSWGE PKALAPFAEG SPFYGLDIPQ DVAVSSQVMA QPDPELASRV VAELSDGTPL
VTRKPLGQGQ VILFHVTANA EWSSLPLSGL FVDMLERLAV SSASKPPSAD DLEGTTWQAV
EVLDGFGRLT DADTLSGVAG PDLIDAPSGP TLQPGLYTSG SGAYARNVLR DGDGIEPSIW
PASVPVLTYE GAAERPLGGL LLSLALVLLA VDIAAALWVS GLWSPAKVAT IALGMGLAGS
GFIALPPAAQ AQMATPLNLP SETELTSELT LGHVLTGDAR VDQIAAEGLR GLSNVMTLRT
SVEPAAPYGV DLETDELAFF PFLYWPVTEG QPLPSSEAYS KLNAYLRTGG MILFDTRDAD
LTQTGASSGA ARRLQQLALP LDIPPLEPIP ADHVLTRAFY LLQDFPGRHP RGQIWVEAAP
PDAKQVDGLP FRNLNDGVTP VVIGGNDWAA AWAVDERNSP LYPVGRGFSG ERQRELARRF
GVNLLMHVLT GNYKSDQVHV PALLDRLGQ
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