| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2754 |
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| Symbol | |
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| ID | 4077626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2902654 |
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| End bp | 2903043 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638008079 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_614748 |
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| Protein GI | 99082594 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.155396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTATCG AACGTATCGG CGCAGAGCGC ACCGGCGCAG GTGGACAGAA CCTGCCGTTT
TCCCCTGCCA CCCGCGCGGG TGACTTCGTC TTTATCTCTG GTCAGGTCGC GATGAATGAG
CGCGGTGAGA TCGAGCCCGG CGGCATCGAG GCGCAGACCA AGCGCACCAT GGAAAACGTG
ATTGCCGTGC TGGCCCAGGC GGGTTGCACG CTGGATGACG TGGCAAAGGT GAACGTGTGG
CTCGATGATC CCCGCGATTT CTGGACCTTC AACCGCGTCT ACGCGAGCTA TTTCCCCAAC
GGCGCGCCAT CGCGCTCCAC TGTGCGCTCG CAGCTGATGG TGGATGCAAA GATCGAAATC
GACGTCACCG CCTATAAGCC GCTGGGCTGA
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| Protein sequence | MTIERIGAER TGAGGQNLPF SPATRAGDFV FISGQVAMNE RGEIEPGGIE AQTKRTMENV
IAVLAQAGCT LDDVAKVNVW LDDPRDFWTF NRVYASYFPN GAPSRSTVRS QLMVDAKIEI
DVTAYKPLG
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