| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2729 |
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| Symbol | |
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| ID | 4077036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2872121 |
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| End bp | 2873308 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638008054 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_614723 |
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| Protein GI | 99082569 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGATTA AACCGCTCTC GGGTGTTCGG GTCCTCGACC TGACCAATGT GCTAGCAGGG
CCGTATTGCT GTTATCAGCT GGCCCTGTTG GGGGCAGAAG TCATCAAGGT CGAGCGCCCC
GGCACCGGCG ATCTTGCTCG CCAACTGGGT GCCGACCCGG AGCGGAATAA ATCCCTGATG
GGGGTCAGTT TTCTGGCGCA GAACGCGCAG AAGAAATCCG TGACCCTCGA CATGAAACAT
GAAACTGGCA AGGCGCTTCT CAAGCGTCTT GTCCGCAGCT CTGATGTCCT AGTCGAGAAT
TTTCGCCCGG GAGTCATGGA CCGGCTGGGG CTCGGTTATG AGGTCCTCAA GGCGGAAAAT
CCAAACCTCA TCTACTGCGC CATTAGCGGC TTTGGCCAAG ATGGCCCGTG GAAGAACAAC
CCCGCCTATG ACCAGATCGT GCAGGGCATC AGCGGCGTGA TGTCGATCAC CGGCGATGGC
GAAAGCGCAC CATTGCGTGT GGGGTATCCG CTTGCCGATA CCGTGGGCGG CATGACGGCC
GCGTTTGCAA TCTCGGCAGC GCTCAACGAT CCGGAGCGCG GCGCGTTTCT GGATATCTCC
ATGACGGAGG CGGTGATTTC CACCATGGGA TGGGTGGTCT CCAACCACCT GATCGCGGGG
CAGACGCCGG GCGCGCATGG CAATGAGAAC ACAACTTCTG CGCCCTCGGG TACCTTTGCC
TGTGCGGATG GTCCGATCAA TGTGGCCGCA AACCGGGATG AGCAATGGCA ATCCATGGCG
CGCCATCTCG GACGCGCGGA TCTGCTCGAC CACCCGGATT ATGCAACCCG TGAGGATCGA
AAACGCAACC GGCACATGCT GCGCGCGGAA CTCGAATGCG TGCTGCGGAC CCGGCCTGCC
GCCAACTGGG TGGCCGAACT CAACGCGCTG GGCGTGCCCT CGGGGCCGGT GCTGACGGTG
CCGCAAATTC TCGAAGAGCC TCAGATCAAG GATCGTGGCC TGATTGCTGA GGTCGAGACC
GAAGGCGCGC CGCTGTCGCT TGCGGGCGCG CCCGTGCGGT TTGGCACCCA TCGCCCGGTC
CCGGATCAGG CGCCACCCGT GCTTGGTGCC GACAATACCA GCATCTGGCA GGACCTCGGC
CTCAGCGCAG AAGAGATCGA AACCTTGCGA CAGGAGCGCG TGATATGA
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| Protein sequence | MGIKPLSGVR VLDLTNVLAG PYCCYQLALL GAEVIKVERP GTGDLARQLG ADPERNKSLM
GVSFLAQNAQ KKSVTLDMKH ETGKALLKRL VRSSDVLVEN FRPGVMDRLG LGYEVLKAEN
PNLIYCAISG FGQDGPWKNN PAYDQIVQGI SGVMSITGDG ESAPLRVGYP LADTVGGMTA
AFAISAALND PERGAFLDIS MTEAVISTMG WVVSNHLIAG QTPGAHGNEN TTSAPSGTFA
CADGPINVAA NRDEQWQSMA RHLGRADLLD HPDYATREDR KRNRHMLRAE LECVLRTRPA
ANWVAELNAL GVPSGPVLTV PQILEEPQIK DRGLIAEVET EGAPLSLAGA PVRFGTHRPV
PDQAPPVLGA DNTSIWQDLG LSAEEIETLR QERVI
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