| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2579 |
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| Symbol | |
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| ID | 4077490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2717304 |
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| End bp | 2717813 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007903 |
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| Product | peptide deformylase |
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| Protein accession | YP_614573 |
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| Protein GI | 99082419 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.231026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000660539 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCTGT TGCCTATCGT CCAATGGCCG GATCCGCGCC TGTCGACGGC CTGTGCTCCG
GTGGGGGCTG CCGAAGACCT TGGCACGCTG ATCGACGATG TGTTGGAGAC CATGTATGCC
GCACCCGGGC GCGGCCTTGC AGCGCCTCAG GTGGGGGTGC TGAAGCGGGT GTTCGTGATG
GACGTCGATT GGAAAGAGGG CCCGCGCAAC CCTGTGGTGA TGATATACCC CGAAGTCCTG
TGGCGCAGCG ACGACACCAC ACTGGCCAAG GAGGCCTGCC TTTCAATCCC GGGACTTTCC
ACGCGGATCA CCCGCCCCAC AAAGATCCGC ATACGCTGGC AGGACGCTGA TCGTGCTGCG
CAGGAACAAA CCTTTGATGG CTTTGCTGCC CGCTGTATCC AGCATGAATA TGACCACCTT
GATGGACGCG TTACATTCGA TCACTTTTCC TCCGAGGAAC GCCGACTTCT TGAGGCGCAG
TATCTCTCTC AAAACGAGGC GACCGCATGA
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| Protein sequence | MSLLPIVQWP DPRLSTACAP VGAAEDLGTL IDDVLETMYA APGRGLAAPQ VGVLKRVFVM
DVDWKEGPRN PVVMIYPEVL WRSDDTTLAK EACLSIPGLS TRITRPTKIR IRWQDADRAA
QEQTFDGFAA RCIQHEYDHL DGRVTFDHFS SEERRLLEAQ YLSQNEATA
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