| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2532 |
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| Symbol | |
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| ID | 4076534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2672639 |
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| End bp | 2673442 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007856 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_614526 |
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| Protein GI | 99082372 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTT CCATCTCTGG CAAGACAGCC ATTGTGACTG GCGCGGCCAA TGGTATCGGC
CTGGCGATTG GTCGGCAGTT CGCCCGTGAA GGTGCAAATG TAATGTTTGT GGATCACGAT
GAGCCAACGC TCCTGCAAGA GCTGGGCGGT GACGTGGAGG ACAGCAATAT CCGCCATTTC
GCGGGTGATT TGCGCGAACG CCTGACCATT GCCAACCTGT TGTCAGCGAC CATCGACGCG
TTTGATCAGG TCGACATTCT GGTCAATGGC GCCCGAAAGG TCGTGCCCAG CGAGCCACTG
AACCCCGACG ACGAAAGCGT TGAGTTCCTG TTAAAGCAAA ACCTCATGTC CACGCTGCGT
CTGTCGCAGC ATGTGGCCAA ACGGATGATC CGTCAGGCTG AGGAGCGTGA CGATGAGGGC
CCCAATGGCG CCATCATCAA CCTGTCGTCC ATCGCCGCAC GGCGCACCCA CCCCGACCTT
ATGGGCTATT CGGTGGCCTC GGCGGCGCTC GATCAGATGA CGCGCTCTTT GGCGGTTTCG
CTTGCGCCGC ACCGGATACG GGTGAATTCC ATCGCGTTCG GTTCCGTGAT GAGCGCATCC
ATGCAGGCGA CGTTGAAGGA CAACCGTTCC TTGCGCCAGG ACATTGAAGA GCACACCCCG
CTCAATCGGA TTGCGCCGCC GACCGAGCTG ACCGAGACCG CGCAGTTTCT CGCTTCGGAA
GCCTCGGGCT TCATGACCGG GCAGGTACTG ACGCTCGACG GCGGGCGTAC CCTGCTTGAT
CCTGTCACAG CGCCGGTGCA TTGA
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| Protein sequence | MSFSISGKTA IVTGAANGIG LAIGRQFARE GANVMFVDHD EPTLLQELGG DVEDSNIRHF
AGDLRERLTI ANLLSATIDA FDQVDILVNG ARKVVPSEPL NPDDESVEFL LKQNLMSTLR
LSQHVAKRMI RQAEERDDEG PNGAIINLSS IAARRTHPDL MGYSVASAAL DQMTRSLAVS
LAPHRIRVNS IAFGSVMSAS MQATLKDNRS LRQDIEEHTP LNRIAPPTEL TETAQFLASE
ASGFMTGQVL TLDGGRTLLD PVTAPVH
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