| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2531 |
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| Symbol | |
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| ID | 4076533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2671697 |
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| End bp | 2672599 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007855 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_614525 |
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| Protein GI | 99082371 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0408] Coproporphyrinogen III oxidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAGA ACACGGCAGA AATGCGTGAC GAGAAGGCGC GCGCGGCGGC GTGGTTTCGA
GAGCTGCGAG ATCAGATCGT TGCTGCATTC GAAGGGCTTG AGGACAGCCA CCACGAAGGT
CCCTTTACCG AGATGGGCGC CGGGCGGTTT GATGTGAGCG ACACCAAACG CACCGCCGAG
GATGGTTCCG ACGCGGGTGG TGGCCTTATG AGCGTGATGC GTGGCGGGCG CGTTTTTGAA
AAGGTCGGTG TCAATATCTC CGAGGTCTAC GGCACGCTGG GAGCACGCGC GCAACAGGCG
ATGGCGGCGC GCAAGGGGCT GCCTGGCATG AAGGAAGATC CGCGCTTCTG GGCCTCTGGC
ATTTCCCTCG TGGCGCATAT GCGCAATCCG CATGTGCCTG CGGTTCACAT GAACACCCGC
ATGTTCTGGA CCCCTCATGG CTGGTGGTTC GGGGGTGGCT CAGACCTCAA TCCCTGCATC
GAGTACGACG AGGATACGGC GCATTTCCAT GAGGTGCAGC AGACGCATCT CGACCCCCAT
GGAGCGGATC TTTATCCCCG CCTCAAGGCT TGGGCGGATG AGTATTTCTT TATTCCCCAT
CGCGGTCGGG CGCGGGGTGT TGGCGGGATC TTTCTGGATG ACCACAACAC GGGTGACTGG
GCGCAGGATT TTGCATTGAT TCAGGACATT GGCCGCGCCT TTTTGCCCGC CTTTTTGCCT
TTGGTGGAGC GGCGACGGGG GCATGCGTGC TCTGCGGATG ACAAAGAGGC TCAGCTCATT
CATCGCGGTC TCTATGCCGA ATATAACCTC GTCTACGACC GCGGCACAAA ATTTGGTCTC
GAGACCGGGC ACGATGCCAA TGCAGTCCTG ATGAGCCTGC CTCCGCTGGC GAAATGGATT
TGA
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| Protein sequence | MAQNTAEMRD EKARAAAWFR ELRDQIVAAF EGLEDSHHEG PFTEMGAGRF DVSDTKRTAE
DGSDAGGGLM SVMRGGRVFE KVGVNISEVY GTLGARAQQA MAARKGLPGM KEDPRFWASG
ISLVAHMRNP HVPAVHMNTR MFWTPHGWWF GGGSDLNPCI EYDEDTAHFH EVQQTHLDPH
GADLYPRLKA WADEYFFIPH RGRARGVGGI FLDDHNTGDW AQDFALIQDI GRAFLPAFLP
LVERRRGHAC SADDKEAQLI HRGLYAEYNL VYDRGTKFGL ETGHDANAVL MSLPPLAKWI
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