| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2529 |
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| Symbol | hemC |
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| ID | 4076531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2669522 |
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| End bp | 2670478 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638007853 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_614523 |
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| Protein GI | 99082369 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTGA CCCTGCCCTC TCCCGCTTCG CCCCTCAAGA TCGGCACCCG TGGCTCGCCG
CTCGCGCTTG CACAGGCTTA TGAGACCCGC GACCGACTGG CGCGCGCCTT TGAGCTGGAG
CCCACGGCCT TTGACATCGT GGTGATCAAG ACCACGGGCG ACAATCGCGC CATGATCGAC
GCCGACCGGC CGCTCAAGGA GATCGGCAAC AAGGGTCTCT TCACGAAGGA GATCGAGGAG
GCCTTGCTCT CTGGCGGGAT CGACATTGCG GTTCACTCCA TGAAGGATAT GCCGACACTG
CAGCCCGAGG GCTTGACGCT TGACTGCTAT CTGCCTCGGG AAGATGTGCG CGATGCGTTT
GTGTCACCCG GGATTCACAG CATTGCAGAT TTGCCCGAAG GCGCAGTTGT GGGCACCTCA
TCGCTGCGCA GACGCGCGCA GCTGTTGCAT CGCCGTCCCG ACCTGCAAGT GGTAGAGTTC
CGCGGCAACG TACAAACCCG GCTGCAGAAA CTCGAAAACG GCGTCGCCAG CGCAACCTTT
CTCGCCATGG CGGGACTGAG GCGCCTTGAT ATGGCAGAAG CCGTGCCTGC GACGCCCATT
TCGGTCGACG ACATGCTGCC CGCAGTGGCT CAGGGTGCAA TCGGCATCGA GCGCCGCAGC
AGCGATATCA CCACTGCCGC GATGCTTGAG GCGATCCATC ACGCCGAGAC AAGTTTGCGC
CTTGCCGCCG AACGCGCCTT CCTCGCCGCC TTGGATGGGT CCTGCGAAAC ACCGATTGCC
GCACTTGCCG ATCTCTCTGG CGGCACCATT CAGTTGCGCG GTCAGATCCT GCGCCCCGAC
GGTTCAGAGG CCCTCAGTGA CGAACAGGAC GGCGCAATCG AAGACGGCGC AGAACTCGGT
CGCCAAATGG GTGAGACGCT CAGAGCCCGC GCAGGCGCAG GGTTCTTCGC GCACTAG
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| Protein sequence | MTLTLPSPAS PLKIGTRGSP LALAQAYETR DRLARAFELE PTAFDIVVIK TTGDNRAMID
ADRPLKEIGN KGLFTKEIEE ALLSGGIDIA VHSMKDMPTL QPEGLTLDCY LPREDVRDAF
VSPGIHSIAD LPEGAVVGTS SLRRRAQLLH RRPDLQVVEF RGNVQTRLQK LENGVASATF
LAMAGLRRLD MAEAVPATPI SVDDMLPAVA QGAIGIERRS SDITTAAMLE AIHHAETSLR
LAAERAFLAA LDGSCETPIA ALADLSGGTI QLRGQILRPD GSEALSDEQD GAIEDGAELG
RQMGETLRAR AGAGFFAH
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