Gene TM1040_2509 details

Gene Information

• Locus tag: TM1040_2509
• Symbol: leuD
• ID: 4076511
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ruegeria sp. TM1040
• Kingdom: Bacteria
• Replicon accession: NC_008044
• Strand: +
• Start bp: 2650924
• End bp: 2651529
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 638007833
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_614503
• Protein GI: 99082349
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGAAAAGT TCGAAACCTT CACCGGGATT GCGGCGCCAA TGCCGCTGGT CAACATCGAC 
ACCGATATGA TCATCCCCAA GCAGTTCCTG AAAACCATCA AACGCTCCGG CCTTGGTGTG 
CATGCCTTTG ACGAGATGCG GTATGATCGG CAGGGCAACG AAGTGCCTGA CTTCGTGCTG 
AACAAACCGG CCTACCGCGA GAGCTCCATC CTGGTGGCAG GCGACAACTT CGGTTGTGGT 
TCCTCGCGCG AGCACGCGCC TTGGGCACTG GCAGATTTCG GTATCAAAGT GGTGATCTCC 
ACCTCTTTTG CCGACATCTT CTTCAACAAC TGTTTCAAGA ACGGCATGCT GCCGATCGTT 
CTGCCGCAGG AACAGGTCGA CCTGCTGATG AAGGACGCGG AGAAGGGCGA AAACGCCCGC 
ATGACCGTGG ATCTTGAGGC TCAGGAGATA ACCACCTCCG AGGGTGATGT GATCAAGTTT 
GACGTTGATC CTTTCCGCAA GCACTGCCTG ATCAATGGCC TCGACGACAT TGGTCTGACG 
CTTGAGAAAG CAGATGCGAT CAAGGCATAT GAAGAGCGCG CAGCGCAAGA GCGCCCCTGG 
GTCTGA 

 

Protein sequence

MEKFETFTGI AAPMPLVNID TDMIIPKQFL KTIKRSGLGV HAFDEMRYDR QGNEVPDFVL 
NKPAYRESSI LVAGDNFGCG SSREHAPWAL ADFGIKVVIS TSFADIFFNN CFKNGMLPIV 
LPQEQVDLLM KDAEKGENAR MTVDLEAQEI TTSEGDVIKF DVDPFRKHCL INGLDDIGLT 
LEKADAIKAY EERAAQERPW V