| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2494 |
|---|
| Symbol | |
|---|
| ID | 4076859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 2635245 |
|---|
| End bp | 2635676 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 638007818 |
|---|
| Product | globin |
|---|
| Protein accession | YP_614488 |
|---|
| Protein GI | 99082334 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.357093 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATGG CGATACTGCG TCAGATTGAA GTGCAACTCA TCAAGGTCAG CTTTAATAGG
GTCTTTGCAC AAAAGGCCGC GTTGGCAGAA AAGTTCTACC ATCATCTGTT TCTTGAGCTA
CCTGACGCCG AGGTCATGTT CACCCGTGAT TTCTCGCATC AAACAGAAAT GTTTGCCCGC
GTTCTGACCA CTGGGATGCA GAGTCTCGGA CGAGATCGGG AAATGATGGT TCTGGTTGAT
GACTTGTTGC AACGACACAA GCACCTGGGG CTGACATTGG ACCAGATGTA TACGGCACAA
CGGGCGTTGC ATCTGGCGTT TTGCGAGGTC ATGCAAGCTG AACTCACGGC GGCCGAGGTT
TCTGCCTGGG ACAATGCAAT TGGTCGTCTG TGTCGGGCGT TGGCGGCCGG GATCGAACCC
CCAGCCGCCT GA
|
|---|
| Protein sequence | MGMAILRQIE VQLIKVSFNR VFAQKAALAE KFYHHLFLEL PDAEVMFTRD FSHQTEMFAR
VLTTGMQSLG RDREMMVLVD DLLQRHKHLG LTLDQMYTAQ RALHLAFCEV MQAELTAAEV
SAWDNAIGRL CRALAAGIEP PAA
|
|---|
| |