| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2459 |
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| Symbol | |
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| ID | 4076941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2601478 |
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| End bp | 2602539 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638007783 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_614453 |
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| Protein GI | 99082299 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.36207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGG GAGAGGCTTT TCTGGATCGT CTTGGGATTT CGCTGCCTCT GATACAGGCG
CCGATGGCCG GGGTCTCAAC TCCGAGGCTC GCAGCAGCAG TGACGGACGC CGGCGCGCTT
GGTTCGATCG GGGTGGGGGC CCTGGATGCT AGCGCGACTC GCAAGCAGAT CGAAGAGCTG
CAGCATCTGA CCAATGGGCC CTTCAATGTG AATTTCTTTT GCCATCAGAC GCCGCAGCGC
AACCCTGAGA TCGAGGGTCG CTGGATCCAA CGCAGCGCGC CTTTGTTTGC CCGCATGCAG
GCGGAGCCAC CCAAAGAGCT ATCTGAAATA TATACCAGTT TTCGGGATAC AGACGCATTT
CTCGAGGCGG TGCTGGACCT GCGGCCTGCG GTGGTGAGTT TCCACTTTGG TTTGCCCAAG
CCCCATCAGA TCAGCGCCAT GAAGGCCGCA GGGCTGACAC TGCTGGCGAG CGCCACCTCG
CTGGAGGAGG CCCGCCAGAT CGAAGCGGCG GGGCTGCATG GGATCATAGC ACAAGGGTGG
GAGGCCGGCG GCCACCGGGG TGTTTTTGAA CCTGGCGCCT TGGATGCACG CCTTGGCCTG
CTGGAGCTGG TTGCGGTGCT GGCCGAACAG ACCACCCTGC CGGTGATCGC AGCCGGTGGC
CTGATGACGG GCGCGGAGAT CGCGCGGGCG CTCTCGGCGG GGGCAGTCGC GGCACAGCTC
GGCACCGCGT TTATCGGCTG CCCGGAGAGC AACGCCGATG CTGCCTATCG GGACAGGCTG
GCGCTTGGAG ATGAGACGGT GATGACCGCA GCGATCTCCG GTCGTCCGGC GCGATGTCTC
AGCAATGCCT TCACCGAATG GGCCTCAGAT GTCCCGATTG CAGAAATTCC AGCCTACCCA
TGCGCTTATG ATCTTGGCAA AGCCCTGAAT GCAGTGGCAA CGGCCAAGGG CGTCAGCAGT
TTTGGCTCGC AGTGGGCAGG CATGGGCGCA GATCGCGCTC GGTTTATGCC CGCGCAGGCC
CTGGTGCAGA CCTTGATGGC TGAACTTGCC GCTACAATCT GA
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| Protein sequence | MTKGEAFLDR LGISLPLIQA PMAGVSTPRL AAAVTDAGAL GSIGVGALDA SATRKQIEEL
QHLTNGPFNV NFFCHQTPQR NPEIEGRWIQ RSAPLFARMQ AEPPKELSEI YTSFRDTDAF
LEAVLDLRPA VVSFHFGLPK PHQISAMKAA GLTLLASATS LEEARQIEAA GLHGIIAQGW
EAGGHRGVFE PGALDARLGL LELVAVLAEQ TTLPVIAAGG LMTGAEIARA LSAGAVAAQL
GTAFIGCPES NADAAYRDRL ALGDETVMTA AISGRPARCL SNAFTEWASD VPIAEIPAYP
CAYDLGKALN AVATAKGVSS FGSQWAGMGA DRARFMPAQA LVQTLMAELA ATI
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