| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2440 |
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| Symbol | |
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| ID | 4076922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2579623 |
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| End bp | 2581356 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638007764 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_614434 |
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| Protein GI | 99082280 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.361958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGATA GTAGCATGAC CGATACACAC CGGCAGACGG GCCGGGATTC ACGCCGGGAC
GGGGATCTGG TGCTGGGTGA CGATTGGGTC GCACCAGAGC AGACGGTCGG GCGCGAAATG
CGGGCCAAAC GGGCGCGGCG TGGCTGGTTT TCGCTGCGCG GTTCTCCGCT GGCGCGTAAA
ATCATCACCT TCAACCTGAT TGCACTGATC ATCCTTGTGT CGGGGATCCT CTATTTGAAC
TCCGCGCGGC AGAGCCTTGT ATACCAGCGG CTTGGCACAT TGGTATCCGA GGCGATGCTG
GCTACGGATG TACTTGAGGT GCAGCTTTTT GAGGGGGGCG AGGCTGGTGT CACACCCAGC
GCGGAGGATA TTTCGCGCAC GCTCGATAAT ATTTCGTTGC GTGGCGGCGT TGAAATTTTT
GTGTTTGATA CGTCGCTGAC CCTGTTGGAC CAGCAAAAAG GCGTCATGCG TGCGGATGCG
CTCAATCGGC TCAACGACAA TGAGGGCGGG CGCACCCTGA TCACTGACAC GCTCAAGGCG
ATCTGGTCTG CGGTGGGCGG CGAAAGCGCG CCGGAAAACG TCGTGGCCGA GATCGACCTG
ACCGAACCCC AGCTTTTGTC TCTCATTCAG CGTGCGCTCA GCGATGGAAC ACAGGTGGGG
GCGGTGCCCG ACAGTGCAGG CGGAACCGTT TACGCCGCGA CCAATCCGAT TTTGCAGCAG
GGCCAGGCAA CGGGCGTTCT GTTGATGACT TCGGCAACTG GCGAAATCGA CCGTCTCGTC
CGCATCGAAC GTGAGCGGGT ATTGCAGATG TTCATCGTCG CCCTCCTGGT CTCTATCGGG
TTGAGCCTCG TGCTGGCTTC CACGATCGCC AACCCCCTTG CCGATCTGGC CGAGGCGGCA
GAGCTCGGCA AGGACCGCGA CAACGACAAG GTCAAACCGG GACGCATTCG CATTCCGGAC
CTCTCGGCGC GCCCGGATGA GATCGGCCGC CTGAGCCGCG CCCTGCGTGG AATGGTCAAA
GCGCTCTATA ATCGTATCGA TAGTAACGAA CAATTTGCAG CTGATGTGGC ACATGAGATC
AAGAATCCTC TGGCCAGTTT GCAGTCTGCG GTCGGCACGC TCCGGATGGT TCACCGAGAA
GACCAACGGG AGAAGCTGAT GGAAGTGATT GAACATGATG TGCGCCGTCT CGATCGGTTG
GTGAGCGACA TTTCCAATGC GTCCCGGTTG GATGCAGAGC TGGTGAAAGA GGACGAAGAA
GACTTTGACC TTCTCAAGAT GCTCGGCAAT CTCAACCAGT ATTTGGGCGA AGACGCCCGC
GGCAAGGGAA TCGATTACAT CACCGAGCTG CCGAATGAGC CGATCTTGAT CCGGGGTCTC
GAGGCCCGTT TGGCGCAGGT TTTTGTCAAT CTGATCACCA ACGCAATTTC GTTCTGCGAA
GAGGGCGATG CGATCCGTGT CTGGGCGCGG CGGCGGGACA ATCGTGTCCT GATCGTGGTC
GAAGACACCG GCCCCGGCAT TCCAGAGCAG GCATTGTCCA AGGTCTTCAA GCGCTTCTAT
TCTCAGCGCC CCGAAGAGCA TTTTGGCAAC AATTCCGGCC TTGGGCTTGC GATTTCCAAG
CAGATTGTTG AGGCGCATGG CGGCGTGATC TGGGCGGAGA ACATTCGCCC CACCGAGGCG
GATCTGACCT CCGAGCCGCT CGGAGCTCGT TTTGTGGTCG GTCTGCCGGT CTGA
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| Protein sequence | MRDSSMTDTH RQTGRDSRRD GDLVLGDDWV APEQTVGREM RAKRARRGWF SLRGSPLARK
IITFNLIALI ILVSGILYLN SARQSLVYQR LGTLVSEAML ATDVLEVQLF EGGEAGVTPS
AEDISRTLDN ISLRGGVEIF VFDTSLTLLD QQKGVMRADA LNRLNDNEGG RTLITDTLKA
IWSAVGGESA PENVVAEIDL TEPQLLSLIQ RALSDGTQVG AVPDSAGGTV YAATNPILQQ
GQATGVLLMT SATGEIDRLV RIERERVLQM FIVALLVSIG LSLVLASTIA NPLADLAEAA
ELGKDRDNDK VKPGRIRIPD LSARPDEIGR LSRALRGMVK ALYNRIDSNE QFAADVAHEI
KNPLASLQSA VGTLRMVHRE DQREKLMEVI EHDVRRLDRL VSDISNASRL DAELVKEDEE
DFDLLKMLGN LNQYLGEDAR GKGIDYITEL PNEPILIRGL EARLAQVFVN LITNAISFCE
EGDAIRVWAR RRDNRVLIVV EDTGPGIPEQ ALSKVFKRFY SQRPEEHFGN NSGLGLAISK
QIVEAHGGVI WAENIRPTEA DLTSEPLGAR FVVGLPV
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