Gene TM1040_2427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2427 
Symbol 
ID4076909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2567295 
End bp2568053 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content60% 
IMG OID638007749 
Productelectron transfer flavoprotein beta-subunit 
Protein accessionYP_614421 
Protein GI99082267 
COG category[C] Energy production and conversion 
COG ID[COG2086] Electron transfer flavoprotein, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTAC TCGTGCCTGT CAAACGCGTG ATTGACTACA ACGTTAAAGT TCGCGTGAAA 
GCGGATGGCA GCGGTGTCGA TCTCGCCAAC GTCAAGATGT CGATGAACCC CTTCGACGAG
ATTGCCGTCG AGGAGGCCAT TCGCCTCAAG GAAGCAGGCA AGGCGGATGA GGTTGTCGCA
GTCTCCATCG GCGTCAAGCA AGCTCAGGAA ACCCTGCGCA CTGCTCTGGC CATGGGTGCC
GACCGCGCGA TCCTCGTGGT TGCCGCAGAT GATGTTCACC AGGACATCGA GCCGCTCGCG
GTTGCAAAGA TCCTCGCCAA AGTGGTCGAA GAAGAGCAGC CCGGCCTTGT GCTGGCAGGC
AAGCAGGCAA TCGACAACGA CATGAACGCC ACCGGCCAGA TGCTTTCTGC TCTCCTCGGG
TGGAGCCAAG CGACCTTCGC GTCTGAGGTG GACATCGATG GCGACAGCGC CAAAGTGACC
CGCGAAGTCG ACGGCGGCCT GCAGACCATC TCGGTCAAGA TGCCGACCAT CGTGACCGTG
GACTTGCGCC TCAACGAGCC GCGCTATGCG TCGCTGCCGA ACATCATGAA GGCAAAGAAA
AAGCCGCTCG ACGAGAAGAC TGCCGCTGAC TACGGCGTTG ACGTCACACC GCGTCTCACC
GTGGTGGAGA CCAAGGAACC CGAAGCCCGC TCCGCAGGTG TCATCGTGGG ATCCGTGGAC
GAGCTGGTTG CGAAACTCAA AGAAGCGGGA GCTGTGTAA
 
Protein sequence
MKVLVPVKRV IDYNVKVRVK ADGSGVDLAN VKMSMNPFDE IAVEEAIRLK EAGKADEVVA 
VSIGVKQAQE TLRTALAMGA DRAILVVAAD DVHQDIEPLA VAKILAKVVE EEQPGLVLAG
KQAIDNDMNA TGQMLSALLG WSQATFASEV DIDGDSAKVT REVDGGLQTI SVKMPTIVTV
DLRLNEPRYA SLPNIMKAKK KPLDEKTAAD YGVDVTPRLT VVETKEPEAR SAGVIVGSVD
ELVAKLKEAG AV