Gene TM1040_2421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2421 
Symbol 
ID4076747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2562244 
End bp2562522 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content61% 
IMG OID638007743 
Producthypothetical protein 
Protein accessionYP_614415 
Protein GI99082261 
COG category[S] Function unknown 
COG ID[COG5477] Predicted small integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00903724 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.690218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAGCT GGATGGCCTG GACCTGGCCC ACCGCCCTTG TCTTCATCGG GATCTTCTCT 
GCCATTGGCG TTCTGATCCT CTTGGAAATC CGCAACCCCG GCGGGGATGC CCGCAAAGGT
GTGCTTGGCC TCACCACAAC ACGCGGTGAC CGGCTGTTCA TCAGCCTCCT TGGCACCTCC
TACATCTTCC TGGCCTGGCT GGGCCTGATG GGGATGCCGC TCTGGACACC GCTAGGGCTC
GCGATTGCAT GGGGCATCTT CTGTTTCTGG AAGGTGTGA
 
Protein sequence
MLSWMAWTWP TALVFIGIFS AIGVLILLEI RNPGGDARKG VLGLTTTRGD RLFISLLGTS 
YIFLAWLGLM GMPLWTPLGL AIAWGIFCFW KV