Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2421 |
Symbol | |
ID | 4076747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2562244 |
End bp | 2562522 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638007743 |
Product | hypothetical protein |
Protein accession | YP_614415 |
Protein GI | 99082261 |
COG category | [S] Function unknown |
COG ID | [COG5477] Predicted small integral membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00903724 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.690218 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAGCT GGATGGCCTG GACCTGGCCC ACCGCCCTTG TCTTCATCGG GATCTTCTCT GCCATTGGCG TTCTGATCCT CTTGGAAATC CGCAACCCCG GCGGGGATGC CCGCAAAGGT GTGCTTGGCC TCACCACAAC ACGCGGTGAC CGGCTGTTCA TCAGCCTCCT TGGCACCTCC TACATCTTCC TGGCCTGGCT GGGCCTGATG GGGATGCCGC TCTGGACACC GCTAGGGCTC GCGATTGCAT GGGGCATCTT CTGTTTCTGG AAGGTGTGA
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Protein sequence | MLSWMAWTWP TALVFIGIFS AIGVLILLEI RNPGGDARKG VLGLTTTRGD RLFISLLGTS YIFLAWLGLM GMPLWTPLGL AIAWGIFCFW KV
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