| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2348 |
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| Symbol | |
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| ID | 4076467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2469041 |
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| End bp | 2470285 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638007670 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_614342 |
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| Protein GI | 99082188 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.795034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGTG GGATTTCGCA AACGGAGGCT GTGCCGATCG CAGCCTGCAC AATCAGTCGA
GACGTTCAGA ACTTCGATCT GCTGATCGAA GACATGGAAG CGGTTATGGG CGAGGCTTGG
GGCGACCTTG GCTTTACTGA ATCGCTCGCG TTTTTCTATC AACCCGAAGC CGAAACTCTG
GAGTTCGTGG CGCTTGCGAT TGACGCGGAG GATGAGGACA ATCTTCCGCT GATGATAGAG
ATCATCACCC AGGCCAAATC CCGCAACATC AAGGTCATTC TGGTGGCAGA GGATGTGACG
CCCGCCGCGC TGCACAAACT GCTGCGCCAA GGCGCGGATG AATTCATCCC CTACCCTCTG
CCGGAACAGG AACTTGCGGC CGCCATTGAC CGCTTGCGTA AACCCGAAGA GGCGCCCGCA
CCCGCAGCGG CGCCACAGCG GGCACATAAG TTGCATGCAG ACAGCCAGCG CGAAGGCGCT
GTGATCGTGA CGCAGGGACT TGCCGGGGGG ACCGGTGCGT CCACATTTGC CGTCAACCTC
GCCTGGGAGC TTGCGGAGCT CAACTCGGGC GATCGCCCCT CTGTGTGCCT GCTTGATCTC
GACCTGCAAA CCGGCTCGGT GTCGACCTAT CTCGACCTTC CGCGCCGCGA GGCGGTGATG
GAGATGCTGA GCGAAACCGA AGCCATGGAT GAGGACATCT TTGGCCAATC CCTGATTTCC
TTTCAGGACA AGCTGCAGGT GCTCACGTCT CCGGCCGATA TGGTGCCGCT GGAGTTCATC
ACGCCCGAAG ATATTTTGCG GGTGGTTGAG ATGGCACGGA GCCACTTTGA TTTTGTGGTC
ATCGACATGC CGCACACAAT GGTGCAGTGG ACCGAAACGG TGCTGAACCT CGCGCATGTC
TATTTTGCGA TGATCGAACT GGATATGCGC TCGGCGCAGA ACGCCTTGCG CGTCAAACGG
GCCCTTCAGT CCGAAGACCT GCCCTTTGAA AAACTGCGTT TCCTGCTCAA CAGAGCCCCG
AGATTCACCG ACCTCAACGG CAAAAGCCGG GTGAAGCGCC TTGCTGAAAG TCTTGGCATT
TCTATCGACG TGCAACTCCC GGATGGCGGA AAAGCGATCC TGCACAGCTG TGATCATGGC
CAACCGCTGG CGATCTCTGC CCCCAAGAAC CCTCTGCGCA AGGAAATCGC CAAGCTGGCG
AAGAACCTGC ATGAGCTGGG ACAGGCAGAG GCGGAAGCCG CCTAA
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| Protein sequence | MTSGISQTEA VPIAACTISR DVQNFDLLIE DMEAVMGEAW GDLGFTESLA FFYQPEAETL
EFVALAIDAE DEDNLPLMIE IITQAKSRNI KVILVAEDVT PAALHKLLRQ GADEFIPYPL
PEQELAAAID RLRKPEEAPA PAAAPQRAHK LHADSQREGA VIVTQGLAGG TGASTFAVNL
AWELAELNSG DRPSVCLLDL DLQTGSVSTY LDLPRREAVM EMLSETEAMD EDIFGQSLIS
FQDKLQVLTS PADMVPLEFI TPEDILRVVE MARSHFDFVV IDMPHTMVQW TETVLNLAHV
YFAMIELDMR SAQNALRVKR ALQSEDLPFE KLRFLLNRAP RFTDLNGKSR VKRLAESLGI
SIDVQLPDGG KAILHSCDHG QPLAISAPKN PLRKEIAKLA KNLHELGQAE AEAA
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