8 homologs were found in PanDaTox collection
for query gene TM1040_2344 on replicon NC_008044
Organism: Ruegeria sp. TM1040



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008044  TM1040_2344  hypothetical protein  100 
 
 
64 aa  124  6e-28  Ruegeria sp. TM1040  Bacteria  normal  0.517003  normal 
 
 
-
 
NC_007493  RSP_6025  hypothetical protein  49.15 
 
 
105 aa  50.4  0.000009  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0542451  n/a   
 
 
-
 
NC_009952  Dshi_1131  hypothetical protein  50 
 
 
70 aa  46.2  0.0002  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_1132  hypothetical protein  50 
 
 
70 aa  46.2  0.0002  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_0560  hypothetical protein  66.67 
 
 
110 aa  43.5  0.001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_2343  hypothetical protein  47.17 
 
 
61 aa  42.7  0.002  Ruegeria sp. TM1040  Bacteria  normal  0.534452  normal 
 
 
-
 
NC_009428  Rsph17025_0307  hypothetical protein  63.33 
 
 
67 aa  42.7  0.002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.382865  normal 
 
 
-
 
NC_007802  Jann_0999  hypothetical protein  40 
 
 
76 aa  40  0.01  Jannaschia sp. CCS1  Bacteria  normal  0.0960019  normal  0.768182 
 
 
-
 
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