| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2324 |
|---|
| Symbol | |
|---|
| ID | 4078314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | + |
|---|
| Start bp | 2444645 |
|---|
| End bp | 2445517 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638007646 |
|---|
| Product | 5'-methylthioadenosine phosphorylase |
|---|
| Protein accession | YP_614318 |
|---|
| Protein GI | 99082164 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0005] Purine nucleoside phosphorylase |
|---|
| TIGRFAM ID | [TIGR01694] 5'-deoxy-5'-methylthioadenosine phosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAGA CATTGATTGC CGTGATCGGC GGCTCCGGCA TTTACGAGAT CGACGGGCTG
GAAGGCGCCG CGTGGACCAC CGTCGAAACC CCTTGGGGCA CGCCCTCGGA CCAGATCCTC
ACCGGGCGGC TTGAGGGTGT CAAAATGGCG TTCCTGCCGC GCCATGGCCG GGGTCATGTG
CATGCCCCAA GCGATGTGCC CTACCGGGCC AATATCGACG CCCTGAAACG TCTCGGGGCC
ACGGATGTGA TCTCCGTCTC TGCCTGCGGC TCCTTTCGCG AGCACATGGC GCCCGGCGAT
TTTGTCATCG TGGATCAGTT CATCGACCGC ACGTTTGCGC GCGCCAAGAG CTTCTTTTCC
TCGGGCTGCG TGGCGCATGT GGCGCTGGCG CATCCGACCT GCCCACGTCT GAGCGATGCG
GTCGAAGCCG CCGCAGGCGC AGCCGGGATC AACACACATC GTGGCGGCAC CTATCTGGCG
ATGGAGGGGC CGCAGTTTTC CACGCTTGCG GAATCCAAGA TGTACCGCGA GCACTGGGGC
GCGGATGTGA TCGGCATGAC CAATATGCCA GAGGCAAAAC TCGCCCGTGA GGCCGAGCTC
TGCTATGCCT CCGTGGCCAT GGTCACCGAT TACGACAGCT GGCACCCCGA CCACGGCGAG
GTGGATGTGA CCGCCGTCAT CGCCACCCTC AAAGGCAACT CTGAAAAAGG GCGCGCCTTG
ATCAAGGGCC TGCCCGCACG TCTGGGCGCA GAGCGCGCGC CCTGCCCCCA TGGCTGTGAC
CGCGCGCTGG AGTATGCCAT CATGACCGCG CCCGAAAAAC GGGACCCGGC GCTTTTGGCC
AAGCTGGATG CCGTCGCAGG ACGCGTGCTC TGA
|
|---|
| Protein sequence | MTETLIAVIG GSGIYEIDGL EGAAWTTVET PWGTPSDQIL TGRLEGVKMA FLPRHGRGHV
HAPSDVPYRA NIDALKRLGA TDVISVSACG SFREHMAPGD FVIVDQFIDR TFARAKSFFS
SGCVAHVALA HPTCPRLSDA VEAAAGAAGI NTHRGGTYLA MEGPQFSTLA ESKMYREHWG
ADVIGMTNMP EAKLAREAEL CYASVAMVTD YDSWHPDHGE VDVTAVIATL KGNSEKGRAL
IKGLPARLGA ERAPCPHGCD RALEYAIMTA PEKRDPALLA KLDAVAGRVL
|
|---|
| |