| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2206 |
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| Symbol | glpD |
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| ID | 4078197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2316535 |
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| End bp | 2318115 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007528 |
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| Product | glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_614200 |
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| Protein GI | 99082046 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.440136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATT CCTCGCAAAG CACCGAGATC ACCGATCTCT TCATCATTGG CGGCGGCATC
AATGGCTGTG GCATCGCGCG CGACGCAGCA GGCCGTGGGC TTTCCGTGAC CCTCGCGGAA
AAGAACGATC TCGCGTCCGC GACATCCTCG GCCTCGACCA AGCTCTTTCA CGGCGGGCTG
CGCTATCTTG AATATTTCGA GTTCCGCCTC GTCCAGGAAG CCCTGATCGA ACGTGAAGTA
CTGCTGCGTG CGATGCCGCA TATCTCCTGG CCAATGCGCT TTGTGCTGCC CTTTCACAAA
GACATGCGGT TCGACAACAC CACACCAACC TCCAAACTGC TCACCACCTT CATGCCATGG
ATGAAAGGCC GCCGCCCTGC GTGGCTGATC CGGCTGGGCC TTTTCATGTA CGATACGCTT
GGCAAACGCG GCATCCTGCC CGGCACCACG ACGGTGGATC TGACCCGTGA CGAGGCAGGC
AAGCCGCTGC AATCAAAATT CAAAAAGGCC TTTGAATATT CCGACTGCTG GGTCGAGGAC
GCTCGCCTCG TGGTGCTCAA TGCGCGCGAC GCCGAAAGCC GCGGCACAGA GATCCTGACC
CGCACCGAAG TCATCAACGC CACCCGCCAC GCCGATCACT GGGAGATCCG CCTCAGGGAT
CTTGCCACCG GCGAGGAAGA AACGCGCCGC GCCAAGATGC TCGTCAATGC CGGTGGCCCA
TGGGTTGCAG ATGTGCTGCG CCAGAAGCTG GGCCAGAACA GCCGCGAAAA CGTACGCCTC
GTGCGCGGCA GCCATATCGT CGTGCCCAAG CTATATGATC ATGGGCGCTG CTATTTCTTC
CAGGGTCAGG ATGGGCGCAT CATCTTTGCC ATCCCCTACG AGGAAGACTT CACCCTCATC
GGCACCACGG ATGCAGATCA CCCAGATCCC GAAACAAAAC CCGTCTGCAC CGAGGAAGAG
CAGGATTATC TGGTGCGCTT TGCCTCGAAC TACTTCGAGC GCCCCGTCAC GCGCGAGCAG
ATCGTCTGGA CCTACTCGGG CGTGCGCCCG CTCTATGACG ATGGCGCCAG CTCGGCGTCG
GCAGCGACGC GTGAATATGT GCTGACACTC GACACCGCCC AAGCCCCTTT GCTCAACGTC
TTTGGCGGCA AGATCACCAC CTATCGCAAA CTCGCCGAAG CCGCGCTCGA GAAGATCAAC
GAAGTCTTTC CAGAGCTGCC TGAGAAATGG ACGGCCGGTG TCGCTCTGCC CGGTGGCGAC
TTCCCCGTCG AGGGCGTGAC GGAACTGGGT GCCAAACTCG CGCAAGACTA TCCGTTCCTC
ACCCCCTATG CCGTGCGCCG CCTGATCCGC GCCTATGGCA CCGAGGCTTG GGATGTTCTG
GGCGATGCGA CCACGCCGTC GGATCTCGGG GAGGATTTTG GCGCGACCAT CACCGCGCGC
GAATTGGACT GGACCATTCA AAACGAATGG GTGCGCTCCG GAGAGGACTA CCTCTGGCGC
CGAACCAAAC TCGGCCTGCG TCTCGATGCA GACGCTCGCG GTGCCGTCAA CCGCTACATC
GAGGCGCGCA TCACCGGCTA A
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| Protein sequence | MTDSSQSTEI TDLFIIGGGI NGCGIARDAA GRGLSVTLAE KNDLASATSS ASTKLFHGGL
RYLEYFEFRL VQEALIEREV LLRAMPHISW PMRFVLPFHK DMRFDNTTPT SKLLTTFMPW
MKGRRPAWLI RLGLFMYDTL GKRGILPGTT TVDLTRDEAG KPLQSKFKKA FEYSDCWVED
ARLVVLNARD AESRGTEILT RTEVINATRH ADHWEIRLRD LATGEEETRR AKMLVNAGGP
WVADVLRQKL GQNSRENVRL VRGSHIVVPK LYDHGRCYFF QGQDGRIIFA IPYEEDFTLI
GTTDADHPDP ETKPVCTEEE QDYLVRFASN YFERPVTREQ IVWTYSGVRP LYDDGASSAS
AATREYVLTL DTAQAPLLNV FGGKITTYRK LAEAALEKIN EVFPELPEKW TAGVALPGGD
FPVEGVTELG AKLAQDYPFL TPYAVRRLIR AYGTEAWDVL GDATTPSDLG EDFGATITAR
ELDWTIQNEW VRSGEDYLWR RTKLGLRLDA DARGAVNRYI EARITG
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