Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2205 |
Symbol | |
ID | 4078196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2315748 |
End bp | 2316542 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638007527 |
Product | DeoR family transcriptional regulator |
Protein accession | YP_614199 |
Protein GI | 99082045 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCCA ACGACCGCCA AAACGAAATC CTTTCCTTGC TGACCCAGCA GGATCGCGTC GAGGTCGAAG ACCTCGCGCA GCGCTTTGGC GTATCCTTGC AGACGGTGCG AACAGACTTG CGTGACCTCT CTGCCCGAGG GCAGCTCAGC CGCGTGCATG GCGGCGCGAT GCGCATCAGC TCGGCGTCAA ATCGCGGCTA TGCCGAACGG CGCAGCCTCA ACGCGACCGG CAAGCGCGCG ATGGCAGCTC TGGCGGCTGA GGTGATCCCG GAAAACTGCT CCATCGCGCT CAATATCGGC ACCTCCACCG AACAGGTCGC GCGTGCACTC TCTGGCCACA AGGGCCTCAC GGTGCTCTCA AACAACATCA ACATTATCAA TATGATGATG GAAATGGAGA CGCGTGACCT GATCCTTGTT GGCGGCTCCA TCCGGCAAAG CGACGGCGCC ATCGTCGGCG AAGAGGCCGT CGAGTTCATC AATCGATACA AGGTCGATTA CGCCGTGATC GGCGCCTCTG CCATGGACGC CGACGGTGCC ATCCTCGACC ACGACGCGCG CGAAGTATCC GTCGCCCGCG CGATCCTCAA AAACGCCCGC ACGCGCATCC TGATGTGCGA CGGCAGCAAA TTCGACCGCT CTGCCCCAGT GCGCATCTGC GCGCTGGCCG AGCTGGACCT TGTCATCACC GACCGCCCCG TTCCCGCGGA ATTTGCCGAG GCCGCAGAGG CCGCTGGCAC ACGAATCCTC ATCGCAGACG GCGGCGCAGA AAACGAAAGC AGCGCAAATG ACTGA
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Protein sequence | MDANDRQNEI LSLLTQQDRV EVEDLAQRFG VSLQTVRTDL RDLSARGQLS RVHGGAMRIS SASNRGYAER RSLNATGKRA MAALAAEVIP ENCSIALNIG TSTEQVARAL SGHKGLTVLS NNINIINMMM EMETRDLILV GGSIRQSDGA IVGEEAVEFI NRYKVDYAVI GASAMDADGA ILDHDAREVS VARAILKNAR TRILMCDGSK FDRSAPVRIC ALAELDLVIT DRPVPAEFAE AAEAAGTRIL IADGGAENES SAND
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