Gene TM1040_2190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2190 
Symbol 
ID4078181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2299874 
End bp2300920 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content59% 
IMG OID638007512 
Productaldo/keto reductase 
Protein accessionYP_614184 
Protein GI99082030 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.888803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA ACCGGCTTGG CCGCACAGAT ATGATGGTGA CCGATCTGTG CCTTGGGACC 
ATGACCTATG GCACTCAGAC CGATGAAGCG GATGCGCATG CGCAGATCGA CATGGCGCTG
GAAGCGGGGA TCAACTTCCT CGATACCGCT GAGATGTATC CAGTGAACCC CATTCGGGCG
GAGACCCTTG GTCTGAGCGA AGAGATCATC GGCAACTGGA ACCAAAAGAC CGGCCGCCGG
AAGGACTATA TCCTTGCGAC AAAACACTCA GGCGAGGGCT CCGTGGCGCG CGACGGGGCG
CCGATCACAG GCAAAACCAT TGCGGCGACC GTTGAGGCAT CGTTGAAGCG GCTCAAGACC
GACTACATCG ACCTTTATCA GTTTCACTGG CCAAACCGCG GCAGCTACAT GTTCCGCAAG
AACTGGAGTT ATGATCCGAC CGCTTCTTCT TATAATCGCG CGCAGGTGAT CGCGGATATG
GAAGAATGCC TCGCCGCGTT GCAGGCGCAA GTCGAAAAGG GCAACATCCG CGCCTTTGGG
CTTTCCAATG AAAGCGCCTG GGGCACTGCG CAATGGCTGC GTCTGGCGGA AGAGGGCAAG
GGCCCGCGGG TTGCCTCGAT CCAGAACGAA TACTCTTTGC TGTGCAGGCT TTATGACACG
GACCTGGCAG AGCTGAGCCA CTATGAGGAT GTTGGCTTGC TGTCGTTCTC TCCTTTGGGG
GCCGGGTATC TCACCGGGAA ATATCAAGAG GGTGCGGTGC CGGAAAAGTC GCGCAAGTCG
ATCAACCCGG AGATGGGCGG GCGGCAGTCT GATCGGGTAG AGGCGGCCGT CGCGGCCTAC
CTGACGATCG CGGCCGATCA TGGGCTGGAT CCGGTGCATA TGGCGCTGGG GTGGTGCCGG
ACACGGCCGT TTATGGCTTC GGCGATCTTT GGTGCGACCG ATGTGGCGCA GCTCGCGCAT
ATCCTTGAAG GTGCGGATCT TGAACTGGCG CCCGAAGTTC TGGCTCAGAT CGATCAGGCC
CATCGCGCCC ATGCGATGCC GTACTGA
 
Protein sequence
MKKNRLGRTD MMVTDLCLGT MTYGTQTDEA DAHAQIDMAL EAGINFLDTA EMYPVNPIRA 
ETLGLSEEII GNWNQKTGRR KDYILATKHS GEGSVARDGA PITGKTIAAT VEASLKRLKT
DYIDLYQFHW PNRGSYMFRK NWSYDPTASS YNRAQVIADM EECLAALQAQ VEKGNIRAFG
LSNESAWGTA QWLRLAEEGK GPRVASIQNE YSLLCRLYDT DLAELSHYED VGLLSFSPLG
AGYLTGKYQE GAVPEKSRKS INPEMGGRQS DRVEAAVAAY LTIAADHGLD PVHMALGWCR
TRPFMASAIF GATDVAQLAH ILEGADLELA PEVLAQIDQA HRAHAMPY