| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2169 |
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| Symbol | |
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| ID | 4076768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2281704 |
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| End bp | 2282726 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638007491 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_614163 |
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| Protein GI | 99082009 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.867959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACCT TCGAACAGCT GACCGGCCTT GCCGACCAAC TCTGCCCAAT GCATGTGATC
ATTGACGCGG ATGGCCTGAT CGTGAGCCAC GGTCCGACCC TCGACAAGAT CCGGGGCGAC
AATGGCTGGT TGGGCAAACC GGTGCTCGAG GTGCTGGACC TGCAGCGGCC TCGCTCCGTC
AAAGCCGTTG CTGATCTCAT GAATACCGCT GGCAGCAAAC TGCACTTTCA GCTTCATGAC
GCGCCGCACA CCCGGATGAA GGGCGTGTTG GTTCCGCTCC CCAAGGGGCG GGGCGCATTC
ATAAATCTCT CTTTCGGGAT TTCGGTGCTG GATGCGGTGC GCGACTTCAA CCTGACCAGT
CAGGATTTCT CGCCCACGGA TCTCACGATC GAGATGCTTT ACCTGGTGGA GGCGAAATCT
GCCGCTATGG AGGCGTCGCG CCAGCTGAAC CTGCGCTTGC AGGGGGCCAA GATTGCCGCC
GAGGAGCAGG CCTTTACCGA TACGTTGACC GGGCTGAAGA ACCGTCGCGC CATGGACCAT
GTGTTGAACC GCCTGATCAG CGGCGGGCGC GACTTTGCCC TGATGAATGT CGATCTCGAC
TTCTTCAAAT CTGTCAATGA CACCTACGGT CATGCCGCAG GTGATGCGGT GTTGCAGCGG
GTGGCCTCCA TCATGGTGGA GTGTACACGC AAATCTGACA CCGTTGCGCG CATCGGTGGT
GACGAGTTTG TGCTGGTGTT TGAGGGGTTG ATGGATCGCA ACCGGATCAA TGATCTGGCC
TGCCGCCTGA TCGAGCGCCT TGAAGAGCCG ATCATGTATG GCGCGGATGA GTGCCGGATT
TCCGCCTCTG CAGGCACCAC CTTGTCCACG GATGTCGCGC AGCCTCTGCC GGCGACGCTA
TTGCATCAGG CCGACCTTGC GCTCTACGCC TCCAAACGGG CGGGCAAAGC GCAGCATATG
TTCTATACGC CCAGCCTCGA AGATGAGATG GATCTGGTCG AGCAAAACAG CAAGTCTGCC
TGA
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| Protein sequence | MMTFEQLTGL ADQLCPMHVI IDADGLIVSH GPTLDKIRGD NGWLGKPVLE VLDLQRPRSV
KAVADLMNTA GSKLHFQLHD APHTRMKGVL VPLPKGRGAF INLSFGISVL DAVRDFNLTS
QDFSPTDLTI EMLYLVEAKS AAMEASRQLN LRLQGAKIAA EEQAFTDTLT GLKNRRAMDH
VLNRLISGGR DFALMNVDLD FFKSVNDTYG HAAGDAVLQR VASIMVECTR KSDTVARIGG
DEFVLVFEGL MDRNRINDLA CRLIERLEEP IMYGADECRI SASAGTTLST DVAQPLPATL
LHQADLALYA SKRAGKAQHM FYTPSLEDEM DLVEQNSKSA
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